RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 PGRMC1O00264 195 aaKnown RBP20.46■□□□□ 0.87
CHTOP-204ENST00000368694 AP1G2O75843 785 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 ACRP10323 421 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 PSMA2P25787 234 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 ACADSBP45954 432 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 MAP3K7CLP57077 242 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 PIGHQ14442 188 aaPredicted RBP20.46■□□□□ 0.87
CHTOP-204ENST00000368694 CLEC20AQ6ZU45 233 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 RSRC2Q7L4I2 434 aaKnown RBP20.46■□□□□ 0.87
CHTOP-204ENST00000368694 CEP57Q86XR8 500 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 MYLPFQ96A32 169 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 TMEM209Q96SK2 561 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.46■□□□□ 0.87
CHTOP-204ENST00000368694 GRAP2O75791 330 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 DGKIO75912 1065 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 BEST1O76090 585 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 AMHP03971 560 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 PEX5P50542 639 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 FAM171A1Q5VUB5 890 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 FAM117BQ6P1L5 589 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 OLFML1Q6UWY5 402 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 PIGZQ86VD9 579 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 NOA1Q8NC60 698 aaKnown RBP20.45■□□□□ 0.86
CHTOP-204ENST00000368694 SPATA4Q8NEY3 305 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 ACTRT1Q8TDG2 376 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 SMARCD1Q96GM5 515 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 HSFY1Q96LI6 401 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 RNPC3Q96LT9 517 aaKnown RBP20.45■□□□□ 0.86
CHTOP-204ENST00000368694 TMEM175Q9BSA9 504 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 CYLDQ9NQC7 956 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 PRKAG2Q9UGJ0 569 aa20.45■□□□□ 0.86
CHTOP-204ENST00000368694 SF3B1O75533 1304 aaKnown RBP eCLIP20.45■□□□□ 0.86
CHTOP-204ENST00000368694 F8VP50 259 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 PAPSS1O43252 624 aaPredicted RBP20.44■□□□□ 0.86
CHTOP-204ENST00000368694 GALTP07902 379 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 GJC1P36383 396 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 RWDD2BP57060 319 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 SLC6A3Q01959 620 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 ZNF572Q7Z3I7 529 aaPredicted RBP20.44■□□□□ 0.86
CHTOP-204ENST00000368694 ZDHHC17Q8IUH5 632 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 TOP1MTQ969P6 601 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.44■□□□□ 0.862e-9■■■■□ 19.3
CHTOP-204ENST00000368694 MARCH5Q9NX47 278 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 ALPK3Q96L96 1907 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 SYN3O14994 580 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 GABBR2O75899 941 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 DEFB103AP81534 67 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 MAPRE1Q15691 268 aaKnown RBP20.44■□□□□ 0.86
CHTOP-204ENST00000368694 SEL1L2Q5TEA6 688 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 FAM171BQ6P995 826 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 TMCO2Q7Z6W1 182 aaPredicted RBP20.44■□□□□ 0.86
CHTOP-204ENST00000368694 RHOT1Q8IXI2 618 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 FNIP1Q8TF40 1166 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 RHOBTB2Q9BYZ6 727 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 GPR62Q9BZJ7 368 aa20.44■□□□□ 0.86
CHTOP-204ENST00000368694 NLRC5Q86WI3 1866 aa20.43■□□□□ 0.86
CHTOP-204ENST00000368694 EFCAB14O75071 495 aa20.43■□□□□ 0.86
CHTOP-204ENST00000368694 ALDH7A1P49419 539 aaKnown RBP20.43■□□□□ 0.86
CHTOP-204ENST00000368694 WDR5P61964 334 aaKnown RBP20.43■□□□□ 0.86
CHTOP-204ENST00000368694 ADIGQ0VDE8 80 aa20.43■□□□□ 0.86
CHTOP-204ENST00000368694 VARS2Q5ST30 1063 aaKnown RBP20.43■□□□□ 0.86
CHTOP-204ENST00000368694 CC2D1AQ6P1N0 951 aaPredicted RBP20.43■□□□□ 0.86
CHTOP-204ENST00000368694 FUT10Q6P4F1 479 aa20.43■□□□□ 0.86
CHTOP-204ENST00000368694 RASGEF1CQ8N431 466 aa20.43■□□□□ 0.86
CHTOP-204ENST00000368694 NIPA2Q8N8Q9 360 aa20.43■□□□□ 0.86
CHTOP-204ENST00000368694 CLEC4CQ8WTT0 213 aa20.43■□□□□ 0.86
CHTOP-204ENST00000368694 LRRC4Q9HBW1 653 aa20.43■□□□□ 0.86
CHTOP-204ENST00000368694 TMLHEQ9NVH6 421 aa20.43■□□□□ 0.86
CHTOP-204ENST00000368694 PTPRDP23468 1912 aa20.43■□□□□ 0.86
CHTOP-204ENST00000368694 PSTPIP1O43586 416 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 CAPN15O75808 1086 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 FGGP02679 453 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 BDNFP23560 247 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 RPL34P49207 117 aaKnown RBP20.42■□□□□ 0.86
CHTOP-204ENST00000368694 TAS2R40P59535 323 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 TUBB4BP68371 445 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 TAF5Q15542 800 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 SPOUT1Q5T280 376 aaKnown RBP20.42■□□□□ 0.86
CHTOP-204ENST00000368694 ZFYVE27Q5T4F4 411 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 AADACL2Q6P093 401 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 UBE2Q1Q7Z7E8 422 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 LRRTM3Q86VH5 581 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 KCNK16Q96T55 309 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 SMOQ99835 787 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 PLVAPQ9BX97 442 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 RBM12Q9NTZ6 932 aaKnown RBP20.42■□□□□ 0.86
CHTOP-204ENST00000368694 OAZ2O95190 189 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 PDGFRAP16234 1089 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 GPD1P21695 349 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 RABGGTBP53611 331 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 OTOP2Q7RTS6 562 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 TMEM173Q86WV6 379 aaPredicted RBP20.42■□□□□ 0.86
CHTOP-204ENST00000368694 SIX6OS1Q8N1H7 587 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 B3GALT6Q96L58 329 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 PKMYT1Q99640 499 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 TMEM59LQ9UK28 342 aa20.42■□□□□ 0.86
CHTOP-204ENST00000368694 OR4Q2P0C623 313 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 PYGMP11217 842 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 FLT3P36888 993 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 CACNA2D1P54289 1103 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms