RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ULK2Q8IYT8 1036 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 ABRAQ8N0Z2 381 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 RBM15BQ8NDT2 890 aaKnown RBP18.21■□□□□ 0.51
CHTOP-203ENST00000368690 PIP4K2CQ8TBX8 421 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 CYTH2Q99418 400 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 MXRA8Q9BRK3 442 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 C11orf70Q9BRQ4 267 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 DDX56Q9NY93 547 aaKnown RBP18.21■□□□□ 0.51
CHTOP-203ENST00000368690 EFR3BQ9Y2G0 817 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 SPECC1L-ADORA2AF8WAN1 911 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 ZCCHC18P0CG32 403 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 ATF7P17544 494 aaPredicted RBP18.21■□□□□ 0.51
CHTOP-203ENST00000368690 GRM2Q14416 872 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 KAZNQ674X7 775 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
CHTOP-203ENST00000368690 NIPA1Q7RTP0 329 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 LCA5Q86VQ0 697 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 WWP1Q9H0M0 922 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 TOPORSQ9NS56 1045 aaPredicted RBP18.21■□□□□ 0.51
CHTOP-203ENST00000368690 USTQ9Y2C2 406 aa18.21■□□□□ 0.51
CHTOP-203ENST00000368690 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.21■□□□□ 0.51
CHTOP-203ENST00000368690 SMIM31A0A1B0GVY4 71 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 H3BRJ5 948 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 SGK1O00141 431 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 BUD23O43709 281 aaKnown RBP18.2■□□□□ 0.5
CHTOP-203ENST00000368690 BGNP21810 368 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 GJC1P36383 396 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 PEX3P56589 373 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 PRKG1Q13976 671 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 DCAF15Q66K64 600 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 CPT1BQ92523 772 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 GLIS2Q9BZE0 524 aaPredicted RBP18.2■□□□□ 0.5
CHTOP-203ENST00000368690 SORCS3Q9UPU3 1222 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 MRPL11Q9Y3B7 192 aaKnown RBP18.2■□□□□ 0.5
CHTOP-203ENST00000368690 CALCAP01258 141 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 QARSP47897 775 aaKnown RBP18.2■□□□□ 0.5
CHTOP-203ENST00000368690 STAT2P52630 851 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 CBLBQ13191 982 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 FNBP1LQ5T0N5 605 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 PALM2Q8IXS6 379 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 TMEM161BQ8NDZ6 487 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 APBB2Q92870 758 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 DDX50Q9BQ39 737 aaKnown RBP18.2■□□□□ 0.5
CHTOP-203ENST00000368690 WDR83Q9BRX9 315 aaKnown RBP18.2■□□□□ 0.5
CHTOP-203ENST00000368690 ZNF341Q9BYN7 854 aa18.2■□□□□ 0.5
CHTOP-203ENST00000368690 TMEM191CA6NGB0 347 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 PI4K2BG5E9Z4 385 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 GOLGA8RI6L899 631 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 SPAG6O75602 509 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 TMEM191BP0C7N4 346 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 CLDN10P78369 228 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 PDSS2Q86YH6 399 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 RHPN2Q8IUC4 686 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 FBXO36Q8NEA4 188 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 RAB3IL1Q8TBN0 382 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 SLC44A1Q8WWI5 657 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 DCPSQ96C86 337 aaKnown RBP18.19■□□□□ 0.5
CHTOP-203ENST00000368690 FAM111AQ96PZ2 611 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 WRNIP1Q96S55 665 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 TMEM121Q9BTD3 319 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 ADAM33Q9BZ11 813 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 SLC7A8Q9UHI5 535 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 TMX2Q9Y320 296 aa18.19■□□□□ 0.5
CHTOP-203ENST00000368690 FAM237BA0A1B0GVD1 139 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 I3L4J1 428 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ATP9BO43861 1147 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 RNASEH1O60930 286 aaKnown RBP18.18■□□□□ 0.5
CHTOP-203ENST00000368690 BANF1O75531 89 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 PYGLP06737 847 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 STIP1P31948 543 aaKnown RBP18.18■□□□□ 0.5
CHTOP-203ENST00000368690 CDKN2BP42772 138 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 RANBP1P43487 201 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ASPHQ12797 758 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ITGA9Q13797 1035 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 MSS51Q4VC12 460 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 C2CD6Q53TS8 623 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 WDR44Q5JSH3 913 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ATG16L1Q676U5 607 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ALYREFQ86V81 257 aaKnown RBP18.18■□□□□ 0.5
CHTOP-203ENST00000368690 TREML1Q86YW5 311 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 TTC13Q8NBP0 860 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 OR6Y1Q8NGX8 325 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 FAM172AQ8WUF8 416 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 NAT14Q8WUY8 206 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 MTBPQ96DY7 904 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ZCWPW1Q9H0M4 648 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 C12orf65Q9H3J6 166 aaKnown RBP18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ARMCX1Q9P291 453 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 CNTN6Q9UQ52 1028 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 AP1G1O43747 822 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ENO1P06733 434 aaKnown RBP18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ACO1P21399 889 aaKnown RBP18.18■□□□□ 0.5
CHTOP-203ENST00000368690 PTK7Q13308 1070 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 MAP7Q14244 749 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ATP13A4Q4VNC1 1196 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 C1orf146Q5VVC0 180 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 DLK2Q6UY11 383 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 PDIK1LQ8N165 341 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 GPD1LQ8N335 351 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 LZICQ8WZA0 190 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms