RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 BST1Q10588 318 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 UBAP2LQ14157 1087 aaKnown RBP18.7■□□□□ 0.58
CHTOP-201ENST00000368686 KBTBD6Q86V97 674 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 PPM1KQ8N3J5 372 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 CCDC33Q8N5R6 958 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 RIN3Q8TB24 985 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 GIPC3Q8TF64 312 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 SERAC1Q96JX3 654 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 FAM20AQ96MK3 541 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 HAUS8Q9BT25 410 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 PCDH9Q9HC56 1237 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 TFCP2L1Q9NZI6 479 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 APPL1Q9UKG1 709 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 POMPQ9Y244 141 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 FADS3Q9Y5Q0 445 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 ZBTB5O15062 677 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 ITM2AO43736 263 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 LDHBP07195 334 aaKnown RBP18.69■□□□□ 0.58
CHTOP-201ENST00000368686 ETS1P14921 441 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 COPAP53621 1224 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 PTK7Q13308 1070 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 PDAP1Q13442 181 aaKnown RBP18.69■□□□□ 0.58
CHTOP-201ENST00000368686 RARS2Q5T160 578 aaKnown RBP18.69■□□□□ 0.58
CHTOP-201ENST00000368686 SH2D5Q6ZV89 423 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 C1orf186Q6ZWK4 172 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 TMEM126BQ8IUX1 230 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 PQLC1Q8N2U9 271 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.69■□□□□ 0.58
CHTOP-201ENST00000368686 DDX1Q92499 740 aaKnown RBP18.69■□□□□ 0.58
CHTOP-201ENST00000368686 E2F7Q96AV8 911 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 CNBD2Q96M20 576 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 OSBPL6Q9BZF3 934 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.69■□□□□ 0.58
CHTOP-201ENST00000368686 RRN3Q9NYV6 651 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 ITGA11Q9UKX5 1188 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 PSMD13Q9UNM6 376 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 IKBKGQ9Y6K9 419 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 SDR42E2A6NKP2 422 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 USP17L15C9J2P7 530 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 USP17L13C9JLJ4 530 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 USP17L11C9JVI0 530 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 USP17L18D6R9N7 530 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 USP17L22D6RA61 530 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 USP17L17D6RBQ6 530 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 USP17L19D6RCP7 530 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 USP17L20D6RJB6 530 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 PMM2O15305 246 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 GRIN3BO60391 1043 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 SLITRK3O94933 977 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 HSPA13P48723 471 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 NUP107P57740 925 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 PFKPQ01813 784 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 ZNF543Q08ER8 600 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 USP17L24Q0WX57 530 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 RALGPS1Q5JS13 557 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 USP17L6PQ6QN14 398 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 CLEC4GQ6UXB4 293 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 MCOLN2Q8IZK6 566 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 ITPKCQ96DU7 683 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 COX4I2Q96KJ9 171 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 AGAP3Q96P47 875 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 CCT7Q99832 543 aa18.69■□□□□ 0.58
CHTOP-201ENST00000368686 ZNF536O15090 1300 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 KDM4FA0A1W2PPD8 638 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 COPEO14579 308 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 KLHL2O95198 593 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 ADRA2BP18089 450 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 CD58P19256 250 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 MXI1P50539 228 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 WASHC5Q12768 1159 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 PALM2Q8IXS6 379 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 LRRC47Q8N1G4 583 aaKnown RBP18.68■□□□□ 0.58
CHTOP-201ENST00000368686 RAB3IL1Q8TBN0 382 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 CCDC124Q96CT7 223 aaKnown RBP18.68■□□□□ 0.58
CHTOP-201ENST00000368686 EIF2AK1Q9BQI3 630 aaKnown RBP18.68■□□□□ 0.58
CHTOP-201ENST00000368686 TUBA8Q9NY65 449 aaPredicted RBP18.68■□□□□ 0.58
CHTOP-201ENST00000368686 FARP1Q9Y4F1 1045 aaPredicted RBP18.68■□□□□ 0.58
CHTOP-201ENST00000368686 TAF1P21675 1872 aa18.68■□□□□ 0.58
CHTOP-201ENST00000368686 ASTN2O75129 1339 aaPredicted RBP18.68■□□□□ 0.58
CHTOP-201ENST00000368686 GOLGA8SH3BPF8 625 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 GOLGA8MH3BSY2 632 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 NFX1Q12986 1120 aaKnown RBP18.67■□□□□ 0.58
CHTOP-201ENST00000368686 IYDQ6PHW0 289 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 OLFML1Q6UWY5 402 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 DNAJC14Q6Y2X3 702 aaPredicted RBP18.67■□□□□ 0.58
CHTOP-201ENST00000368686 DEPTORQ8TB45 409 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 DOT1LQ8TEK3 1739 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 TRPC4APQ8TEL6 797 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 SRPK1Q96SB4 655 aaKnown RBP18.67■□□□□ 0.58
CHTOP-201ENST00000368686 EXOC7Q9UPT5 735 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 JAG2Q9Y219 1238 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 PLIN4Q96Q06 1357 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 FBP2O00757 339 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 PIAS1O75925 651 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 GYS1P13807 737 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 TAS2R40P59535 323 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 AP3B2Q13367 1082 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 C16orf72Q14CZ0 275 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 TEX44Q53QW1 395 aa18.67■□□□□ 0.58
CHTOP-201ENST00000368686 PPIL6Q8IXY8 311 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms