RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 SLC6A11P48066 632 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 CCT8P50990 548 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 NFKB2Q00653 900 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 ILKQ13418 452 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 EPHA7Q15375 998 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 MGAT5BQ3V5L5 792 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 CDCA2Q69YH5 1023 aaPredicted RBP11.23□□□□□ -0.61
TUBE1-201ENST00000368657 SDE2Q6IQ49 451 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 METTL3Q86U44 580 aaKnown RBP11.23□□□□□ -0.61
TUBE1-201ENST00000368657 MICU3Q86XE3 530 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 ADGRG2Q8IZP9 1017 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 KIAA1958Q8N8K9 716 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 TTC16Q8NEE8 873 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 ETNPPLQ8TBG4 499 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 GIPC2Q8TF65 315 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 IGSF8Q969P0 613 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 SEPT5Q99719 369 aaPredicted RBP11.23□□□□□ -0.61
TUBE1-201ENST00000368657 LXNQ9BS40 222 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 C22orf23Q9BZE7 217 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 ARHGEF4Q9NR80 690 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 CLCA2Q9UQC9 943 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 TAF6LQ9Y6J9 622 aa11.23□□□□□ -0.61
TUBE1-201ENST00000368657 TRAV19A0A0A6YYK7 116 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 A0A1B0GVT2 93 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 METTL12A8MUP2 240 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 TRIM66O15016 1216 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 ZBTB39O15060 712 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 LARGE1O95461 756 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 NCAM1P13591 858 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 HOXB2P14652 356 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 ATF6P18850 670 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 NDUFV2P19404 249 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 NMT1P30419 496 aaKnown RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 NTSR1P30989 418 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 CSNK1EP49674 416 aaKnown RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 AFF3P51826 1226 aaKnown RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 SMARCB1Q12824 385 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 DMP1Q13316 513 aaPredicted RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 TEAD4Q15561 434 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 EEF1DP3Q658K8 133 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 CCDC81Q6ZN84 652 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 SFTPA1Q8IWL2 248 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 ZFRQ96KR1 1074 aaKnown RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 NACC1Q96RE7 527 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 CYP2S1Q96SQ9 504 aa11.22□□□□□ -0.61
TUBE1-201ENST00000368657 CCDC94Q9BW85 323 aaPredicted RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 POLR3FQ9H1D9 316 aaPredicted RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 WSB2Q9NYS7 404 aaPredicted RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 PLEKHB1Q9UF11 243 aaPredicted RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 TIMM13Q9Y5L4 95 aaPredicted RBP11.22□□□□□ -0.61
TUBE1-201ENST00000368657 A0A1W2PQF6 199 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 TBC1D3BA6NDS4 549 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 HMGA1P17096 107 aaKnown RBP11.21□□□□□ -0.61
TUBE1-201ENST00000368657 ITGB6P18564 788 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 HSPA4P34932 840 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 GRM5P41594 1212 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 KIF19Q2TAC6 998 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 DCAF12L1Q5VU92 463 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 OVOS1Q6IE37 1185 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 MOXD1Q6UVY6 613 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 DCBLD1Q8N8Z6 715 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 C1orf216Q8TAB5 229 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 SH3RF2Q8TEC5 729 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 IPO4Q8TEX9 1081 aaKnown RBP11.21□□□□□ -0.61
TUBE1-201ENST00000368657 C2orf15Q8WU43 125 aaKnown RBP11.21□□□□□ -0.61
TUBE1-201ENST00000368657 RFFLQ8WZ73 363 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 CCDC97Q96F63 343 aaPredicted RBP11.21□□□□□ -0.61
TUBE1-201ENST00000368657 CNDP2Q96KP4 475 aaKnown RBP11.21□□□□□ -0.61
TUBE1-201ENST00000368657 FAM20AQ96MK3 541 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 ZMAT2Q96NC0 199 aaKnown RBP11.21□□□□□ -0.61
TUBE1-201ENST00000368657 ARHGAP9Q9BRR9 750 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 TTC12Q9H892 705 aaPredicted RBP11.21□□□□□ -0.61
TUBE1-201ENST00000368657 ZDHHC4Q9NPG8 344 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 ANKEF1Q9NU02 776 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 WDR70Q9NW82 654 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 UXTQ9UBK9 157 aaPredicted RBP11.21□□□□□ -0.61
TUBE1-201ENST00000368657 SNX11Q9Y5W9 270 aa11.21□□□□□ -0.61
TUBE1-201ENST00000368657 CACNA1DQ01668 2161 aa11.21□□□□□ -0.62
TUBE1-201ENST00000368657 MYO18AQ92614 2054 aaKnown RBP11.21□□□□□ -0.62
TUBE1-201ENST00000368657 STK36Q9NRP7 1315 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 CKMP06732 381 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 NFICP08651 508 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 TYMPP19971 482 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 OXTRP30559 389 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 AFMP43652 599 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 ACADVLP49748 655 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 RESTQ13127 1097 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 DHCR24Q15392 516 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 RTN1Q16799 776 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 ARL13BQ3SXY8 428 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 LINC00303Q3SY05 128 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 TBCKQ8TEA7 893 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 TOE1Q96GM8 510 aaKnown RBP11.2□□□□□ -0.62
TUBE1-201ENST00000368657 MMS19Q96T76 1030 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 GPR174Q9BXC1 333 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 OSGEPQ9NPF4 335 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms