RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 DLL1O00548 723 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 COPB1P53618 953 aaKnown RBP15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 CLEC20AQ6ZU45 233 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 ATXN3LQ9H3M9 355 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 SMOC2Q9H3U7 446 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 CBX8Q9HC52 389 aa15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 DMAP1Q9NPF5 467 aaPredicted RBP15.99■□□□□ 0.15
SMPDL3A-201ENST00000368440 MICAL2O94851 1124 aa15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 F11P03951 625 aa15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 MAP3K7CLP57077 242 aa15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 PARM1Q6UWI2 310 aa15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 DENND5BQ6ZUT9 1274 aa15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 RBBP8NLQ8NC74 664 aaPredicted RBP15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 FGF14Q92915 247 aa15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 TRMT2BQ96GJ1 504 aaKnown RBP15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 MYRFLQ96LU7 910 aa15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 CSNK1G1Q9HCP0 422 aa15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 TRIOO75962 3097 aa15.98■□□□□ 0.15
SMPDL3A-201ENST00000368440 FAM200BP0CF97 657 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 TRIM21P19474 475 aaKnown RBP15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 KLK7P49862 253 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 ZNF132P52740 706 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 IFRD2Q12894 506 aaPredicted RBP15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 HTR4Q13639 388 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 ARHGAP44Q17R89 818 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 JAKMIP2Q96AA8 810 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 ZSWIM1Q9BR11 485 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 RPP25Q9BUL9 199 aaKnown RBP15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 KCNK12Q9HB15 430 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 GDE1Q9NZC3 331 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 ZFP37Q9Y6Q3 630 aaPredicted RBP15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 ANHXE9PGG2 379 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 TNFRSF10BO14763 440 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 CD19P15391 556 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 CDK11BP21127 795 aaKnown RBP15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 ARHGAP17Q68EM7 881 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 GPRIN1Q7Z2K8 1008 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 LUZP1Q86V48 1076 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 SCAMP5Q8TAC9 235 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 TFAP2BQ92481 460 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 TTLL2Q9BWV7 592 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 LSM14BQ9BX40 385 aaKnown RBP15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 SLITRK6Q9H5Y7 841 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 CNTN6Q9UQ52 1028 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 NUMBLQ9Y6R0 609 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 NCANO14594 1321 aa15.97■□□□□ 0.15
SMPDL3A-201ENST00000368440 BECN2A8MW95 431 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 HHLA1C9JL84 531 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 FGF19O95750 216 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 PNMA6AP0CW24 399 aaPredicted RBP15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 FCARP24071 287 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 BRD2P25440 801 aaKnown RBP15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 CDC25CP30307 473 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 SLC5A3P53794 718 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 PTPN21Q16825 1174 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 GOLGA7BQ2TAP0 167 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 SGO2Q562F6 1265 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 FAM78AQ5JUQ0 283 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 GPR158Q5T848 1215 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 TTC30AQ86WT1 665 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 GPIHBP1Q8IV16 184 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 NUP93Q8N1F7 819 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 CEP295NLQ96MC4 621 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 GCNAQ96QF7 691 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 KXD1Q9BQD3 176 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 DNAI2Q9GZS0 605 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 ACP6Q9NPH0 428 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 DNAJC12Q9UKB3 198 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 TSPAN16Q9UKR8 245 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 FHOD1Q9Y613 1164 aa15.96■□□□□ 0.15
SMPDL3A-201ENST00000368440 NCOR1O75376 2440 aa15.96■□□□□ 0.14
SMPDL3A-201ENST00000368440 LRRC10BA6NIK2 292 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 LGALS16A8MUM7 142 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 O00370 1275 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 PAEPP09466 180 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 VDRP11473 427 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 KRT5P13647 590 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 NPR3P17342 541 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 MFAP3P55082 362 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 TXNDC8Q6A555 127 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 ENOSF1Q7L5Y1 443 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 ANKRD20A12PQ8NF67 263 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 ZSCAN18Q8TBC5 510 aaPredicted RBP15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 ASB16Q96NS5 453 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 DUSP16Q9BY84 665 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 UXTQ9UBK9 157 aaPredicted RBP15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 HELZP42694 1942 aaKnown RBP15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 TULP2O00295 520 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 TPM2P07951 284 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 KLHDC7AQ5VTJ3 777 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 TANGO2Q6ICL3 276 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 SHC3Q92529 594 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 SLC46A2Q9BY10 475 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 PLA2G2FQ9BZM2 168 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 EPHX3Q9H6B9 360 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 IGSF9Q9P2J2 1179 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 SORCS3Q9UPU3 1222 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 SIK3Q9Y2K2 1263 aa15.95■□□□□ 0.14
SMPDL3A-201ENST00000368440 EPHB6O15197 1021 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms