RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 NFE2Q16621 373 aaPredicted RBP16.76■□□□□ 0.27
LMNA-203ENST00000368297 ERCC6LQ2NKX8 1250 aa16.76■□□□□ 0.27
LMNA-203ENST00000368297 OR6B2Q6IFH4 312 aa16.76■□□□□ 0.27
LMNA-203ENST00000368297 CLEC20AQ6ZU45 233 aa16.76■□□□□ 0.27
LMNA-203ENST00000368297 DDX53Q86TM3 631 aaKnown RBP16.76■□□□□ 0.27
LMNA-203ENST00000368297 RNF168Q8IYW5 571 aaPredicted RBP16.76■□□□□ 0.27
LMNA-203ENST00000368297 TPCN2Q8NHX9 752 aa16.76■□□□□ 0.27
LMNA-203ENST00000368297 SP7Q8TDD2 431 aaPredicted RBP16.76■□□□□ 0.27
LMNA-203ENST00000368297 RPGRIP1Q96KN7 1286 aa16.76■□□□□ 0.27
LMNA-203ENST00000368297 SELENOOQ9BVL4 669 aa16.76■□□□□ 0.27
LMNA-203ENST00000368297 SLC4A5Q9BY07 1137 aa16.76■□□□□ 0.27
LMNA-203ENST00000368297 OXCT2Q9BYC2 517 aaPredicted RBP16.76■□□□□ 0.27
LMNA-203ENST00000368297 RHOBTB2Q9BYZ6 727 aa16.76■□□□□ 0.27
LMNA-203ENST00000368297 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.76■□□□□ 0.275e-9■■□□□ 12.4
LMNA-203ENST00000368297 PCDHGC5Q9Y5F6 944 aa16.76■□□□□ 0.27
LMNA-203ENST00000368297 V9GYY5 206 aaPredicted RBP16.76■□□□□ 0.27
LMNA-203ENST00000368297 LCHNA4D1U4 455 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 GRID2IPA4D2P6 1211 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 TMEM110-MUSTN1A8MSY1 372 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 BEST1O76090 585 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 PLA2G4AP47712 749 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 GABRB2P47870 512 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 RABGGTBP53611 331 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 ZNF268Q14587 947 aaPredicted RBP16.75■□□□□ 0.27
LMNA-203ENST00000368297 SHHQ15465 462 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 ELF2Q15723 593 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 PLEKHA7Q6IQ23 1121 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 PIGZQ86VD9 579 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 XYLT1Q86Y38 959 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 SMOQ99835 787 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 ABI2Q9NYB9 513 aaPredicted RBP16.75■□□□□ 0.27
LMNA-203ENST00000368297 SNX12Q9UMY4 172 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 HYOU1Q9Y4L1 999 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 PCDHB5Q9Y5E4 795 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 MKI67P46013 3256 aaKnown RBP16.75■□□□□ 0.27
LMNA-203ENST00000368297 FGF18O76093 207 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 MTA2O94776 668 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 GJB6O95452 261 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 URODP06132 367 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 LCP1P13796 627 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 CTNNB1P35222 781 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 ACADSBP45954 432 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 HADHBP55084 474 aaKnown RBP16.75■□□□□ 0.27
LMNA-203ENST00000368297 MAMLD1Q13495 774 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 NAA30Q147X3 362 aaPredicted RBP16.75■□□□□ 0.27
LMNA-203ENST00000368297 DCUN1D2Q6PH85 259 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 DAAM2Q86T65 1068 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 SYCE1Q8N0S2 351 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 C3orf20Q8ND61 904 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 FEZF2Q8TBJ5 459 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 PIK3R5Q8WYR1 880 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 CLP1Q92989 425 aaKnown RBP16.75■□□□□ 0.27
LMNA-203ENST00000368297 HSFY1Q96LI6 401 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 PGLYRP2Q96PD5 576 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 CYLDQ9NQC7 956 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 CHST7Q9NS84 486 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 ANAPC7Q9UJX3 599 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 CDY1Q9Y6F8 540 aa16.75■□□□□ 0.27
LMNA-203ENST00000368297 NLRC5Q86WI3 1866 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 BUB1BO60566 1050 aaPredicted RBP16.74■□□□□ 0.27
LMNA-203ENST00000368297 CAPN15O75808 1086 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 FTCDO95954 541 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 RPL17P18621 184 aaKnown RBP16.74■□□□□ 0.27
LMNA-203ENST00000368297 CACNA2D1P54289 1103 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 DSG1Q02413 1049 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 MESDQ14696 234 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 TEX35Q5T0J7 233 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 FAM102AQ5T9C2 384 aaPredicted RBP16.74■□□□□ 0.27
LMNA-203ENST00000368297 FAM183BPQ6ZVS7 135 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 RSRC2Q7L4I2 434 aaKnown RBP16.74■□□□□ 0.27
LMNA-203ENST00000368297 TMEM110Q86TL2 294 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 VPS52Q8N1B4 723 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 GPR161Q8N6U8 529 aaKnown RBP16.74■□□□□ 0.27
LMNA-203ENST00000368297 KLHL23Q8NBE8 558 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 LRRN4CLQ8ND94 238 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 FBXO22Q8NEZ5 403 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 BTBD6Q96KE9 485 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 KCNK16Q96T55 309 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 UBE2OQ9C0C9 1292 aaKnown RBP16.74■□□□□ 0.27
LMNA-203ENST00000368297 LRRC4Q9HBW1 653 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 DMAP1Q9NPF5 467 aaPredicted RBP16.74■□□□□ 0.27
LMNA-203ENST00000368297 METTL5Q9NRN9 209 aaKnown RBP16.74■□□□□ 0.27
LMNA-203ENST00000368297 MTRRQ9UBK8 725 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 STK39Q9UEW8 545 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 BACE2Q9Y5Z0 518 aa16.74■□□□□ 0.27
LMNA-203ENST00000368297 GRXCR1A8MXD5 290 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 TBC1D4O60343 1298 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 CYP2F1P24903 491 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 DNAJB2P25686 324 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 CA8P35219 290 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 GRIK1P39086 918 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 RBM10P98175 930 aaKnown RBP16.73■□□□□ 0.27
LMNA-203ENST00000368297 TAP1Q03518 808 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 RSPO2Q6UXX9 243 aaPredicted RBP16.73■□□□□ 0.27
LMNA-203ENST00000368297 SCN4BQ8IWT1 228 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 SCUBE3Q8IX30 993 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 SIX6OS1Q8N1H7 587 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 KCTD13Q8WZ19 329 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 MCRS1Q96EZ8 462 aa16.73■□□□□ 0.27
LMNA-203ENST00000368297 FUBP3Q96I24 572 aaKnown RBP eCLIP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms