RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CDC42EP1Q00587 391 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 LAMC2Q13753 1193 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 TRIP10Q15642 601 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 LCA5Q86VQ0 697 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 BRSK2Q8IWQ3 736 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 SUGP1Q8IWZ8 645 aaKnown RBP12.15□□□□□ -0.46
COPA-202ENST00000368069 ZCCHC9Q8N567 271 aaKnown RBP12.15□□□□□ -0.46
COPA-202ENST00000368069 CCDC138Q96M89 665 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 POLIQ9UNA4 740 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 UBIAD1Q9Y5Z9 338 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 ENO4A6NNW6 628 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 CLGNO14967 610 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 TM9SF1O15321 606 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 CYP2C9P11712 490 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
COPA-202ENST00000368069 MED21Q13503 144 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 UGP2Q16851 508 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 TATDN1Q6P1N9 297 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 CCDC60Q8IWA6 550 aaPredicted RBP12.14□□□□□ -0.47
COPA-202ENST00000368069 PDCD6IPQ8WUM4 868 aaKnown RBP12.14□□□□□ -0.47
COPA-202ENST00000368069 AFG1LQ8WV93 481 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 PTPRN2Q92932 1015 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 TMA16Q96EY4 203 aaKnown RBP12.14□□□□□ -0.47
COPA-202ENST00000368069 SH3GL2Q99962 352 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 ERVK-5Q9HDB9 667 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 AGPSO00116 658 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 SNX2O60749 519 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 DNAJC8O75937 253 aaPredicted RBP12.14□□□□□ -0.47
COPA-202ENST00000368069 FDFT1P37268 417 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 SV2CQ496J9 727 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 METTL7BQ6UX53 244 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 RASGEF1CQ8N431 466 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 ATPAF2Q8N5M1 289 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 TCP10LQ8TDR4 215 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 ART4Q93070 314 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 SHISA4Q96DD7 197 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 KIAA1257Q9ULG3 409 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 ADCY3O60266 1144 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 VTNP04004 478 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 CYP2C8P10632 490 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 DRD4P21917 467 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 MAPRE2Q15555 327 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 LRRC8EQ6NSJ5 796 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 ABTB1Q969K4 478 aaPredicted RBP12.14□□□□□ -0.47
COPA-202ENST00000368069 HAUS8Q9BT25 410 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 VPS33BQ9H267 617 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 LRRC19Q9H756 370 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 C10orf88Q9H8K7 445 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 KLK14Q9P0G3 267 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 DLGAP2Q9P1A6 1054 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 CDY2AQ9Y6F7 541 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 CDY1Q9Y6F8 540 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 RPS6KL1Q9Y6S9 549 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 RNF103-CHMP3A0A140T963 221 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 APOEP02649 317 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 CHKAP35790 457 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 PTGER2P43116 358 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 ATXN3P54252 364 aaPredicted RBP12.14□□□□□ -0.47
COPA-202ENST00000368069 MRPS35P82673 323 aaKnown RBP12.14□□□□□ -0.47
COPA-202ENST00000368069 CNGA3Q16281 694 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 TEDDM1Q5T9Z0 273 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 DAB2IPQ5VWQ8 1189 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 NOTUMQ6P988 496 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 KIRREL3Q8IZU9 778 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 C2orf69Q8N8R5 385 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 CEP70Q8NHQ1 597 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 ELMO2Q96JJ3 720 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 SLC39A10Q9ULF5 831 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 ORC6Q9Y5N6 252 aa12.14□□□□□ -0.47
COPA-202ENST00000368069 UBA6A0AVT1 1052 aaPredicted RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 AP3B1O00203 1094 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 DDX3YO15523 660 aaKnown RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 UBTFL6P0CB48 400 aaPredicted RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 ETS1P14921 441 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 PTPN4P29074 926 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 AQP5P55064 265 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 MAMLD1Q13495 774 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 DDIASQ8IXT1 998 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 FAM84AQ96KN4 292 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 TMEM237Q96Q45 408 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 TRIM62Q9BVG3 475 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 SNX3O60493 162 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 TAF6P49848 677 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 CDH8P55286 799 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 LRRC23Q53EV4 343 aaPredicted RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 FRA10AC1Q70Z53 315 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 PRUNE1Q86TP1 453 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 DNERQ8NFT8 737 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 CKAP2Q8WWK9 683 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 CYP3A43Q9HB55 503 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 SARS2Q9NP81 518 aaKnown RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 A0A087WZ62 844 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 M0QYT0 321 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 M0R2N6 131 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 GLRA3O75311 464 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 CTSHP09668 335 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 CLK2P49760 499 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms