RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 FGFBP2Q9BYJ0 223 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 ARMC7Q9H6L4 198 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 TAF1P21675 1872 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 CRYBG1Q9Y4K1 1723 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
PRKN-206ENST00000366898 LRRC10BA6NIK2 292 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 FOXO6A8MYZ6 492 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 TNNC2P02585 160 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 IFNA8P32881 189 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 HOXD12P35452 270 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 HALP42357 657 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 CHI3L2Q15782 390 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 TEDDM1Q5T9Z0 273 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 MEI1Q5TIA1 1274 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 CENPPQ6IPU0 288 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 C4orf50Q6ZRC1 276 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 CYFIP1Q7L576 1253 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRKN-206ENST00000366898 DCAF4Q8WV16 495 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 ATG4AQ8WYN0 398 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 ZNF333Q96JL9 665 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 CALN1Q9BXU9 219 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 STK39Q9UEW8 545 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 PRR12Q9ULL5 1215 aa12.19□□□□□ -0.46
PRKN-206ENST00000366898 LRP6O75581 1613 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 SPEF2Q9C093 1822 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 ZBTB7AO95365 584 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 GH1P01241 217 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 ASLP04424 464 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 PBX1P40424 430 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 TPTEP56180 551 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 MRPL28Q13084 256 aaKnown RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 AUHQ13825 339 aaKnown RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 APOBEC3HQ6NTF7 200 aaKnown RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 EXOC3L1Q86VI1 746 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 GLMNQ92990 594 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 KIFC3Q9BVG8 833 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 RAD21L1Q9H4I0 556 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 COPS7BQ9H9Q2 264 aaPredicted RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 PSMC3IPQ9P2W1 217 aaPredicted RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 V9GYQ6 96 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 USP12O75317 370 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 TFPTP0C1Z6 253 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 ATF4P18848 351 aaPredicted RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 CSE1LP55060 971 aaKnown RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 SGSM1Q2NKQ1 1148 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 CCNYL1Q8N7R7 359 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 TPCN2Q8NHX9 752 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 LRRC15Q8TF66 581 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 OSCP1Q8WVF1 389 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 TBATAQ96M53 351 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 IKZF4Q9H2S9 585 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 PTTG2Q9NZH5 202 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 MYRFQ9Y2G1 1151 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 CAPN8A6NHC0 703 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 CCRL2O00421 344 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 WFS1O76024 890 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 PSMC2P35998 433 aaKnown RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 TUBA1BP68363 451 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 PDCD4Q53EL6 469 aaKnown RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 LDLRAP1Q5SW96 308 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 GPR107Q5VW38 600 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 ZBTB49Q6ZSB9 765 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 FRA10AC1Q70Z53 315 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 TUBA1AQ71U36 451 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 IFNLR1Q8IU57 520 aaPredicted RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 SPIRE2Q8WWL2 714 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 ERGIC2Q96RQ1 377 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 TMEM39BQ9GZU3 492 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 RAVER2Q9HCJ3 691 aaKnown RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 FBXO6Q9NRD1 293 aaPredicted RBP12.18□□□□□ -0.46
PRKN-206ENST00000366898 SEL1LQ9UBV2 794 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 TAGLN3Q9UI15 199 aa12.18□□□□□ -0.46
PRKN-206ENST00000366898 NUP98P52948 1817 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.17□□□□□ -0.46
PRKN-206ENST00000366898 PPP1R11O60927 126 aaPredicted RBP12.17□□□□□ -0.46
PRKN-206ENST00000366898 WDR47O94967 919 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 KLHL2O95198 593 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 VCLP18206 1134 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 BGNP21810 368 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 IL10P22301 178 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 GCLMP48507 274 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 TUBP50607 506 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 TTLL12Q14166 644 aaPredicted RBP12.17□□□□□ -0.46
PRKN-206ENST00000366898 SMU1Q2TAY7 513 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 SLC27A3Q5K4L6 730 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 C3orf62Q6ZUJ4 267 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 RFX6Q8HWS3 928 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 ZNF564Q8TBZ8 553 aaPredicted RBP12.17□□□□□ -0.46
PRKN-206ENST00000366898 DEPDC1BQ8WUY9 529 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 E2F7Q96AV8 911 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 CDHR1Q96JP9 859 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 CLPTM1LQ96KA5 538 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 RUSC1Q9BVN2 902 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 EDEM3Q9BZQ6 932 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 REXO4Q9GZR2 422 aaKnown RBP12.17□□□□□ -0.46
PRKN-206ENST00000366898 PRKAG3Q9UGI9 489 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms