RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ADAM12O43184 909 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 HRO43593 1189 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 FAM189A1O60320 539 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 FERP16591 822 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 EIF4A3P38919 411 aaKnown RBP12□□□□□ -0.49
CSNK1E-202ENST00000366216 AP3M2P53677 418 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 RAPGEF1Q13905 1077 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 AMHR2Q16671 573 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 AASDHQ4L235 1098 aaPredicted RBP12□□□□□ -0.49
CSNK1E-202ENST00000366216 ATF7IP2Q5U623 682 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 SV2AQ7L0J3 742 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 IRF2BP2Q7Z5L9 587 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 BRSK2Q8IWQ3 736 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 GPR65Q8IYL9 337 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 FNBP1Q96RU3 617 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 GAD1Q99259 594 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 EIF2AQ9BY44 585 aaKnown RBP12□□□□□ -0.49
CSNK1E-202ENST00000366216 DEF6Q9H4E7 631 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 HAUS4Q9H6D7 363 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 RBAKQ9NYW8 714 aaPredicted RBP12□□□□□ -0.49
CSNK1E-202ENST00000366216 FBXW11Q9UKB1 542 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 DNAJC12Q9UKB3 198 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 HES2Q9Y543 173 aa12□□□□□ -0.49
CSNK1E-202ENST00000366216 HELZ2Q9BYK8 2649 aaKnown RBP12□□□□□ -0.49
CSNK1E-202ENST00000366216 NUP210Q8TEM1 1887 aaPredicted RBP12□□□□□ -0.49
CSNK1E-202ENST00000366216 LOC400499M0QZD8 3231 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 THADAQ6YHU6 1953 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 TTLL13PA6NNM8 815 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 MAN2B1O00754 1011 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 ECI2O75521 394 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 GFPT2O94808 682 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 C4BPAP04003 597 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 PLEKP08567 350 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 CCDC172P0C7W6 258 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 DLATP10515 647 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 IGFBP6P24592 240 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 HOXA9P31269 272 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 CNR2P34972 360 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 SOX5P35711 763 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 ACOT2P49753 483 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 KIF11P52732 1056 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 TERF1P54274 439 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 KLHL30Q0D2K2 578 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 DRAP1Q14919 205 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 PCBP1Q15365 356 aaKnown RBP eCLIP11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 SPA17Q15506 151 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 KYAT1Q16773 422 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 USP41Q3LFD5 358 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 ZACNQ401N2 412 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 PPM1LQ5SGD2 360 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 LIN9Q5TKA1 542 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 GJB7Q6PEY0 223 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 PRSS55Q6UWB4 352 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 NPAS3Q8IXF0 933 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 TXLNBQ8N3L3 684 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 FAM160A2Q8N612 972 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 FBXL13Q8NEE6 735 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 KIF18AQ8NI77 898 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 FAM81BQ96LP2 452 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 CGRRF1Q99675 332 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 PAAF1Q9BRP4 392 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 TCHPQ9BT92 498 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 COLEC11Q9BWP8 271 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 CXCL16Q9H2A7 254 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 UBN1Q9NPG3 1134 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 HCFC1R1Q9NWW0 138 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 RAB20Q9NX57 234 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 MYO1AQ9UBC5 1043 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 AJAP1Q9UKB5 411 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 CPSF3Q9UKF6 684 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 POLIQ9UNA4 740 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 MYO16Q9Y6X6 1858 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 PCNX2A6NKB5 2137 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 PI4KAP42356 2102 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 CACNA1EQ15878 2313 aa11.99□□□□□ -0.49
CSNK1E-202ENST00000366216 GON4LQ3T8J9 2241 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 ASCC3Q8N3C0 2202 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 ARL5CA6NH57 179 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 CHURC1-FNTBB4DL54 471 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 F8VZ95 297 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 CCL16O15467 120 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 AKR1B10O60218 316 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 XYLBO75191 536 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 C8AP07357 584 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 MCF2P10911 925 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 ARHGAP25P42331 645 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 CXCL12P48061 93 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 FNTBP49356 437 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 SCNN1GP51170 649 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 VAV2P52735 878 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 SATB1Q01826 763 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 SRSF5Q13243 272 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 SF3A2Q15428 464 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 ZNF568Q3ZCX4 644 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 ARHGAP29Q52LW3 1261 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 TDRD12Q587J7 1177 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 RTP2Q5QGT7 225 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 SMYD5Q6GMV2 418 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 FUT10Q6P4F1 479 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 WDR49Q8IV35 697 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms