RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 RASSF9O75901 435 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 PDE8BO95263 885 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 NHLRC4P0CG21 123 aaPredicted RBP5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 MYF5P13349 255 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 PDE6CP51160 858 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 EEFSECP57772 596 aaKnown RBP5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 RPS16P62249 146 aaKnown RBP5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 SATB1Q01826 763 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 GBX1Q14549 363 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 PCID2Q5JVF3 399 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 SLC9A4Q6AI14 798 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 DARS2Q6PI48 645 aaKnown RBP5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 NAPRTQ6XQN6 538 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 OSCP1Q8WVF1 389 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 DDB2Q92466 427 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 NELL1Q92832 810 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 C17orf80Q9BSJ5 609 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 DUSP22Q9NRW4 184 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 ADARB2Q9NS39 739 aaKnown RBP5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 ZSCAN32Q9NX65 697 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 COL20A1Q9P218 1284 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 SERGEFQ9UGK8 458 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 OGDHLQ9ULD0 1010 aa5.58□□□□□ -1.52
RNU4-28P-201ENST00000364739 TRIM43BA6NCK2 446 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 TARM1B6A8C7 271 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 PROP1O75360 226 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 PARNO95453 639 aaKnown RBP5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 ZBED1O96006 694 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 PEX2P28328 305 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 CACNB3P54284 484 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 NHLH1Q02575 133 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 TFF2Q03403 129 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 COLEC12Q5KU26 742 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 TEDDM1Q5T9Z0 273 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 CYB5RLQ6IPT4 315 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 CAND1Q86VP6 1230 aaKnown RBP5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 IZUMO1Q8IYV9 350 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 FANCBQ8NB91 859 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 DNAJB14Q8TBM8 379 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 DPF1Q92782 380 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 SPSB4Q96A44 273 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 TRIM43Q96BQ3 446 aaPredicted RBP5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 APIPQ96GX9 242 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 SUCLG2Q96I99 432 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 ZBTB45Q96K62 511 aaPredicted RBP5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 ZNF287Q9HBT7 754 aa5.57□□□□□ -1.52
RNU4-28P-201ENST00000364739 ISM1B1AKI9 464 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 SMIM22K7EJ46 135 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 AP4M1O00189 453 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 GOLIM4O00461 696 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 RASAL1O95294 804 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 FBLP22087 321 aaKnown RBP5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 CYP4F2P78329 520 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 HNRNPA0Q13151 305 aaKnown RBP5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 SLC44A4Q53GD3 710 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 CACHD1Q5VU97 1274 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 FCRLBQ6BAA4 426 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 PARS2Q7L3T8 475 aaKnown RBP5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 SRGAP1Q7Z6B7 1085 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 NMD3Q96D46 503 aaKnown RBP5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 REPS1Q96D71 796 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 LENG8Q96PV6 779 aaPredicted RBP5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 LRRC27Q9C0I9 530 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 AS3MTQ9HBK9 375 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 AFF4Q9UHB7 1163 aaKnown RBP5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 HDAC9Q9UKV0 1011 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 FRMD4BQ9Y2L6 1034 aa5.56□□□□□ -1.52
RNU4-28P-201ENST00000364739 WIPF3A6NGB9 483 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 F8W8V4 182 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 RAB27BO00194 218 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 FRS3O43559 492 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 SRGAP2O75044 1071 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 ONECUT2O95948 504 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 RHCEP18577 417 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 CTGFP29279 349 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 SOX10P56693 466 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 RHDQ02161 417 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 POLD3Q15054 466 aaPredicted RBP5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 L1TD1Q5T7N2 865 aaKnown RBP5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 ANKRD16Q6P6B7 361 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 ZNF782Q6ZMW2 699 aaPredicted RBP5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 Q6ZWC4 215 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 SLC29A4Q7RTT9 530 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 SPARTQ8N0X7 666 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 SOCS4Q8WXH5 440 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 PUS7Q96PZ0 661 aaKnown RBP5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 DPCDQ9BVM2 203 aaPredicted RBP5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 CHST8Q9H2A9 424 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 METTL14Q9HCE5 456 aaKnown RBP5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 DNMT3BQ9UBC3 853 aaKnown RBP5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 LPAR3Q9UBY5 353 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 ITGB1BP2Q9UKP3 347 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 ADAMTS5Q9UNA0 930 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 CDY1Q9Y6F8 540 aa5.55□□□□□ -1.52
RNU4-28P-201ENST00000364739 RGS10O43665 173 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 MGEA5O60502 916 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 HRGP04196 525 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 HGFP14210 728 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 IL1R1P14778 569 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 FPR3P25089 353 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms