RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 FAM35AQ86V20 835 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 DEPDC1BQ8WUY9 529 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 CASKIN2Q8WXE0 1202 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 RSPH1Q8WYR4 309 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 ALS2CR12Q96Q35 445 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 CRISPLD2Q9H0B8 497 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 RGS18Q9NS28 235 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 PCDHGC3Q9UN70 934 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 H3BQF6 201 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 C2CD2LO14523 706 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 FSCN2O14926 492 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 STAU1O95793 577 aaKnown RBP3.02□□□□□ -1.93
LTN1-201ENST00000361371 MYOGP15173 224 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 GUCY2DQ02846 1103 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 PLEKHG4Q58EX7 1191 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 NOMO2Q5JPE7 1267 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 SLC13A5Q86YT5 568 aaPredicted RBP3.02□□□□□ -1.93
LTN1-201ENST00000361371 COLGALT2Q8IYK4 626 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 B3GALNT2Q8NCR0 500 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 IFT81Q8WYA0 676 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 MYLPFQ96A32 169 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 RPS6KC1Q96S38 1066 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 TSEN34Q9BSV6 310 aaKnown RBP3.02□□□□□ -1.93
LTN1-201ENST00000361371 SLC4A5Q9BY07 1137 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 UBXN6Q9BZV1 441 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 OSER1Q9NX31 292 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 GDAP2Q9NXN4 497 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 NAALADL1Q9UQQ1 740 aa3.02□□□□□ -1.93
LTN1-201ENST00000361371 A0A0A6YYK5 440 aaPredicted RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 C2CD4BA6NLJ0 364 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 HHLA1C9JL84 531 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 F5H423 210 aaPredicted RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 DNM1LO00429 736 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 BMP1P13497 986 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 PECAM1P16284 738 aaPredicted RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 DNAJB2P25686 324 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 CDH5P33151 784 aaPredicted RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 BPIFB4P59827 614 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 BEND6Q5SZJ8 279 aaPredicted RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 MSANTD4Q8NCY6 345 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 FUT8Q9BYC5 575 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 CEP41Q9BYV8 373 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 EPB41L5Q9HCM4 733 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 AVENQ9NQS1 362 aaPredicted RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 MTMR10Q9NXD2 777 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 GIT1Q9Y2X7 761 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 PCDHA3Q9Y5H8 950 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 SCN4AP35499 1836 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 LCHNA4D1U4 455 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 KRIT1O00522 736 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 PAEPP09466 180 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 ATICP31939 592 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 YWHAEP62258 255 aaKnown RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 CCNI2Q6ZMN8 369 aaPredicted RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 ZNF365Q70YC5 407 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 SCD5Q86SK9 330 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 TMEM110Q86TL2 294 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 RHOT2Q8IXI1 618 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 CCDC185Q8N715 623 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 PNPLA1Q8N8W4 532 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 TAF4BQ92750 862 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 TBCBQ99426 244 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 PKMYT1Q99640 499 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 HNRNPABQ99729 332 aaKnown RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 CYP3A43Q9HB55 503 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 TMEM39AQ9NV64 488 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 SAGE1Q9NXZ1 904 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 UVRAGQ9P2Y5 699 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 MTUS1Q9ULD2 1270 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 INTUQ9ULD6 942 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 NFU1Q9UMS0 254 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 ZRANB2O95218 330 aaKnown RBP eCLIP3.01□□□□□ -1.93
LTN1-201ENST00000361371 CTNNA1P35221 906 aaKnown RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 PLA2G4AP47712 749 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 GJA8P48165 433 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 TKTL1P51854 596 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 C1QBPQ07021 282 aaKnown RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 MYO1EQ12965 1108 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 SLC39A12Q504Y0 691 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 CCDC181Q5TID7 509 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 FBXO46Q6PJ61 603 aaPredicted RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 GLB1LQ6UWU2 654 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 SND1Q7KZF4 910 aaKnown RBP eCLIP3.01□□□□□ -1.93
LTN1-201ENST00000361371 C3orf20Q8ND61 904 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 FBXO25Q8TCJ0 367 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 MYEOVQ96EZ4 313 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 MCOLN1Q9GZU1 580 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 TMEM161AQ9NX61 479 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 MSI1O43347 362 aaKnown RBP3.01□□□□□ -1.93
LTN1-201ENST00000361371 BANF1O75531 89 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 AP1G2O75843 785 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 MTA2O94776 668 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 USP17L7P0C7H9 530 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 PRLRP16471 622 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 IVDP26440 423 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 AARSP49588 968 aaKnown RBP eCLIP3.01□□□□□ -1.93
LTN1-201ENST00000361371 ADIGQ0VDE8 80 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 ZFYVE27Q5T4F4 411 aa3.01□□□□□ -1.93
LTN1-201ENST00000361371 FAM171A1Q5VUB5 890 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms