RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 DTX3LQ8TDB6 740 aa21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 PSD3Q9NYI0 1048 aa21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 PDS5AQ29RF7 1337 aaKnown RBP21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 CCDC130P13994 396 aa21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 ALDH9A1P49189 494 aa21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 ZNF284Q2VY69 593 aa21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 ZNF280DQ6N043 979 aa21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 RTFDC1Q9BY42 306 aaPredicted RBP21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 FAM129AQ9BZQ8 928 aa21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 THAP2Q9H0W7 228 aa21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 PCDHB2Q9Y5E7 798 aa21.06■□□□□ 0.96
CDC42BPB-201ENST00000361246 TKTL1P51854 596 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 GUCY1A3Q02108 690 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 SLC18A3Q16572 532 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 OTOAQ7RTW8 1153 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 MYL6P60660 151 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 NOL9Q5SY16 702 aaKnown RBP21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 CXCL17Q6UXB2 119 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 EMC1Q8N766 993 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 FAM172AQ8WUF8 416 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 IARS2Q9NSE4 1012 aaKnown RBP21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 GRID2IPA4D2P6 1211 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 TBL3Q12788 808 aaKnown RBP21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 ZFPM1Q8IX07 1006 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 PKD2L2Q9NZM6 624 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 CDYLQ9Y232 598 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 PCDHAC2Q9Y5I4 1007 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 SLFN11Q7Z7L1 901 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 CALR3Q96L12 384 aaKnown RBP21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 FICDQ9BVA6 458 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 SNX8Q9Y5X2 465 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 FAM187AA6NFU0 413 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 TLR8Q9NR97 1041 aaKnown RBP21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 CPSF4O95639 269 aaKnown RBP21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 CCDC159P0C7I6 412 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 CTNNB1P35222 781 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 TP53BP2Q13625 1128 aa21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 PTAR1Q7Z6K3 402 aaPredicted RBP21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.05■□□□□ 0.96
CDC42BPB-201ENST00000361246 OGTO15294 1046 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 TGM2P21980 687 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 IL10P22301 178 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 ERVK-9P63128 1117 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 ERVK-24P63145 666 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 PDIA6Q15084 440 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 PGM5Q15124 567 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 ADSSL1Q8N142 457 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 PLEKHA8Q96JA3 519 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 ZNF556Q9HAH1 456 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 TRDMT1O14717 391 aaKnown RBP21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 ADCY3O60266 1144 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 ITGA8P53708 1063 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 C16orf87Q6PH81 154 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 ATG4AQ8WYN0 398 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 VCLP18206 1134 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 NAMPTP43490 491 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 DEFB115Q30KQ5 88 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 COPS5Q92905 334 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 PHF21AQ96BD5 680 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 BPIFA3Q9BQP9 254 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 CLASP2O75122 1294 aaKnown RBP21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 PLEKP08567 350 aaPredicted RBP21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 STX3Q13277 289 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 FAM167BQ9BTA0 163 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 EIF3DO15371 548 aaKnown RBP eCLIP21.04■□□□□ 0.963e-6■□□□□ 9.2
CDC42BPB-201ENST00000361246 EFCAB14O75071 495 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 OVOS1Q6IE37 1185 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 SLC47A2Q86VL8 602 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 WDR24Q96S15 920 aa21.04■□□□□ 0.96
CDC42BPB-201ENST00000361246 NDUFS2O75306 463 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 FNTAP49354 379 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 DHX34Q14147 1143 aaKnown RBP21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 ITIH5Q86UX2 942 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 DDX42Q86XP3 938 aaKnown RBP eCLIP21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 CYP2W1Q8TAV3 490 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 RSPH1Q8WYR4 309 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 HPGDP15428 266 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 CTCFP49711 727 aaPredicted RBP21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 AP2B1P63010 937 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 SERAC1Q96JX3 654 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 SNCAIPQ9Y6H5 919 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 ABCB1P08183 1280 aaPredicted RBP21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 RPL10AP62906 217 aaKnown RBP21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 ADIGQ0VDE8 80 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 SPATA4Q8NEY3 305 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 LPCAT1Q8NF37 534 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 RDM1Q8NG50 284 aa21.03■□□□□ 0.96
CDC42BPB-201ENST00000361246 PSEN2P49810 448 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 ST13P4Q8IZP2 240 aaPredicted RBP21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 OR9Q1Q8NGQ5 310 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 KCND2Q9NZV8 630 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 N6AMT1Q9Y5N5 214 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 DET1Q7L5Y6 550 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 GALNT4Q8N4A0 578 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 SH2D3CQ8N5H7 860 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 VWA5AO00534 786 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 RBP3P10745 1247 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 ALDH5A1P51649 535 aaPredicted RBP21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 ZNF697Q5TEC3 545 aa21.02■□□□□ 0.96
CDC42BPB-201ENST00000361246 TTC39BQ5VTQ0 682 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms