RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 OXER1Q8TDS5 423 aa10.02□□□□□ -0.8
CUX1-203ENST00000360264 RMND5BQ96G75 393 aaPredicted RBP10.02□□□□□ -0.8
CUX1-203ENST00000360264 ALG13Q9NP73 1137 aaKnown RBP10.02□□□□□ -0.8
CUX1-203ENST00000360264 DPP3Q9NY33 737 aa10.02□□□□□ -0.8
CUX1-203ENST00000360264 ERN1O75460 977 aaKnown RBP10.02□□□□□ -0.8
CUX1-203ENST00000360264 RHOBTB1O94844 696 aa10.02□□□□□ -0.8
CUX1-203ENST00000360264 TDP2O95551 362 aa10.02□□□□□ -0.8
CUX1-203ENST00000360264 ZNF211Q13398 564 aaPredicted RBP10.02□□□□□ -0.8
CUX1-203ENST00000360264 NAB2Q15742 525 aa10.02□□□□□ -0.8
CUX1-203ENST00000360264 IPMKQ8NFU5 416 aa10.02□□□□□ -0.8
CUX1-203ENST00000360264 RAD21L1Q9H4I0 556 aa10.02□□□□□ -0.8
CUX1-203ENST00000360264 PDGFCQ9NRA1 345 aa10.02□□□□□ -0.8
CUX1-203ENST00000360264 TRIM24O15164 1050 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 VPS4BO75351 444 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 PURAQ00577 322 aaKnown RBP10.02□□□□□ -0.81
CUX1-203ENST00000360264 FBXO44Q9H4M3 255 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 KLC4Q9NSK0 619 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 IL1RAPL1Q9NZN1 696 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 IRF1P10914 325 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 CYP4Z2PQ8N1L4 340 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 ERP27Q96DN0 273 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 OXCT2Q9BYC2 517 aaPredicted RBP10.02□□□□□ -0.81
CUX1-203ENST00000360264 MANSC1Q9H8J5 431 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 KLHL28Q9NXS3 571 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 A0A1W2PQJ5 194 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 CSE1LP55060 971 aaKnown RBP10.02□□□□□ -0.81
CUX1-203ENST00000360264 SCARF1Q14162 830 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 RFWD2Q8NHY2 731 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 BLOC1S5Q8TDH9 187 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 ADGRA3Q8IWK6 1321 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 UNC13CQ8NB66 2214 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 ATP6V1C1P21283 382 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 PPIL2Q13356 520 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 C1QTNF7Q9BXJ2 289 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 NRKQ7Z2Y5 1582 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.02□□□□□ -0.817e-8■■■■■ 32
CUX1-203ENST00000360264 TMEM114B3SHH9 223 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 SMIM22K7EJ46 135 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 HNRNPCP07910 306 aaKnown RBP eCLIP10.02□□□□□ -0.817e-7■■□□□ 13.7
CUX1-203ENST00000360264 FAM180AQ6UWF9 173 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 SPIRE2Q8WWL2 714 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 ZNF669Q96BR6 464 aaPredicted RBP10.02□□□□□ -0.81
CUX1-203ENST00000360264 ADGRE3Q9BY15 652 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 CEP44Q9C0F1 390 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 EXOSC4Q9NPD3 245 aaKnown RBP10.02□□□□□ -0.81
CUX1-203ENST00000360264 PPP1R36Q96LQ0 422 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 OLFM1Q99784 485 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 PRDM15P57071 1507 aaPredicted RBP10.02□□□□□ -0.81
CUX1-203ENST00000360264 TTLL13PA6NNM8 815 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 EPB42P16452 691 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 GRK4P32298 578 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 IFNGR2P38484 337 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 RGS7P49802 495 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 LRRC14Q15048 493 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 SNRNP200O75643 2136 aaKnown RBP10.02□□□□□ -0.81
CUX1-203ENST00000360264 RPN2P04844 631 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 NUP107P57740 925 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 CHD1O14646 1710 aa10.02□□□□□ -0.81
CUX1-203ENST00000360264 MGAT4DA6NG13 374 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 CYP19A1P11511 503 aaPredicted RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 ACOT2P49753 483 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 RAB27AP51159 221 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 YWHAZP63104 245 aaKnown RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 SBK1Q52WX2 424 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 ARMCX4Q5H9R4 360 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 EFCAB12Q6NXP0 572 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 MYO1HQ8N1T3 1032 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 BBS2Q9BXC9 721 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 WHRNQ9P202 907 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 UPP2O95045 317 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 TRAF7Q6Q0C0 670 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 GAS2L3Q86XJ1 694 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 FAM71DQ8N9W8 422 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 MOSPD2Q8NHP6 518 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 SH3GL3Q99963 347 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 RNF17Q9BXT8 1623 aaKnown RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 PRR29P0C7W0 189 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 MRPS25P82663 173 aaKnown RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 TMEM260Q9NX78 707 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 MARCOQ9UEW3 520 aaPredicted RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 TIMM44O43615 452 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 GLRA3O75311 464 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 CHRM3P20309 590 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 EPHB2P29323 1055 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 KRT77Q7Z794 578 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 MAGEC3Q8TD91 643 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 DNAJC9Q8WXX5 260 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 PPP1R14AQ96A00 147 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 ADI1Q9BV57 179 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 ADGRG1Q9Y653 693 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 SRGNP10124 158 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 NCAM1P13591 858 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 MZF1P28698 734 aaPredicted RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 PRKAA1Q13131 559 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 SMTNL2Q2TAL5 461 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 JADE3Q92613 823 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 MTERF3Q96E29 417 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 PHF20L1A8MW92 1017 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 PAX3P23760 479 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 CNGA2Q16280 664 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms