RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 MLXIPLQ9NP71 852 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 WDR81Q562E7 1941 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 STRNO43815 780 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 GJB1P08034 283 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 ZSCAN5DPP0CG00 497 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 MIPP30301 263 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 RASA2Q15283 850 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 BBS9Q3SYG4 887 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 LGSNQ5TDP6 509 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 SCYL2Q6P3W7 929 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 VSTM1Q6UX27 236 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 EMC1Q8N766 993 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 ZNF513Q8N8E2 541 aaPredicted RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 JOSD2Q8TAC2 188 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 PWWP2AQ96N64 755 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 GCOM2Q9BZD3 368 aaPredicted RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 PDZD7Q9H5P4 517 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 TXNRD2Q9NNW7 524 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 FETUBQ9UGM5 382 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 IQANK1A0A1B0GTG1 560 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 RRN3P2A6NIE6 340 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 GOLGA8MH3BSY2 632 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 CHUKO15111 745 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 TCF4P15884 667 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 SLC8A1P32418 973 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 SLC25A11Q02978 314 aaKnown RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 GPR162Q16538 588 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 PRCCQ92733 491 aaPredicted RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 MRRFQ96E11 262 aaKnown RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 MCRS1Q96EZ8 462 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 IQCGQ9H095 443 aaKnown RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 HAUS2Q9NVX0 235 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 XPO7Q9UIA9 1087 aaKnown RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 BRCA1P38398 1863 aaKnown RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 SOCS7O14512 581 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 STAU1O95793 577 aaKnown RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 ERBB2P04626 1255 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 NDST1P52848 882 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 SLC8A3P57103 927 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 ADCY1Q08828 1119 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 SF3A3Q12874 501 aaKnown RBP eCLIP9.74□□□□□ -0.852e-6■■□□□ 13.3
GTF3C2-202ENST00000359541 ZRSR2Q15696 482 aaKnown RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 Q3C1V9 767 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 FAM133BQ5BKY9 247 aaKnown RBP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 C4orf22Q6V702 233 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 AFG1LQ8WV93 481 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 CPB2Q96IY4 423 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 CYTH2Q99418 400 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 TBCBQ99426 244 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 RNPEPQ9H4A4 650 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 PAK5Q9P286 719 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 SIX4Q9UIU6 781 aa9.74□□□□□ -0.85
GTF3C2-202ENST00000359541 H3BRB1 525 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 TP73O15350 636 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ZWINTO95229 277 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 TRUB2O95900 331 aaKnown RBP9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ZBED1O96006 694 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 MYCP01106 439 aaPredicted RBP9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 VTNP04004 478 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 INHBAP08476 426 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ARF4P18085 180 aaPredicted RBP9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 GABRB2P47870 512 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 GCLCP48506 637 aaPredicted RBP9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 SLC18A1P54219 525 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ARHGAP1Q07960 439 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 CATSPER4Q7RTX7 472 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 CCDC91Q7Z6B0 441 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 TRABD2AQ86V40 505 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 SESTD1Q86VW0 696 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ZDHHC17Q8IUH5 632 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 PARP9Q8IXQ6 854 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ELOVL4Q9GZR5 314 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 KLC2Q9H0B6 622 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 PLEKHA5Q9HAU0 1116 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 NGRNQ9NPE2 291 aaKnown RBP9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 PDGFCQ9NRA1 345 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 TSPAN16Q9UKR8 245 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 DERAQ9Y315 318 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 SIP14410 1827 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 A6NJR5 290 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 APOL1O14791 398 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 PRPF4O43172 522 aaKnown RBP eCLIP9.73□□□□□ -0.853e-8■■□□□ 12.8
GTF3C2-202ENST00000359541 TROVE2P10155 538 aaKnown RBP eCLIP9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ETS1P14921 441 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 EZRP15311 586 aaKnown RBP9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ZFXP17010 805 aaPredicted RBP9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ORC1Q13415 861 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 CDO1Q16878 200 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 GOLGA7BQ2TAP0 167 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 UBAP2Q5T6F2 1119 aaKnown RBP9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 LCLAT1Q6UWP7 414 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 PRUNE1Q86TP1 453 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ANKMY2Q8IV38 441 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 UBA3Q8TBC4 463 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 SGIP1Q9BQI5 828 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 MINDY3Q9H8M7 445 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 DCTN3O75935 186 aa9.73□□□□□ -0.85
GTF3C2-202ENST00000359541 ATP5HO75947 161 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms