RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 KDELR1P24390 212 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 GEMIN4P57678 1058 aaKnown RBP11.69□□□□□ -0.54
SSU72-202ENST00000359060 OVGP1Q12889 678 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 FASTKD3Q14CZ7 662 aaKnown RBP11.69□□□□□ -0.54
SSU72-202ENST00000359060 CYB5D1Q6P9G0 228 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 NPNTQ6UXI9 565 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 ATP2A3Q93084 1043 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 KIF9Q9HAQ2 790 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 BARX2Q9UMQ3 279 aaPredicted RBP11.69□□□□□ -0.54
SSU72-202ENST00000359060 TNFSF13BQ9Y275 285 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 AKAP5P24588 427 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 EPHX2P34913 555 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 SESN2P58004 480 aaPredicted RBP11.69□□□□□ -0.54
SSU72-202ENST00000359060 TMPRSS15P98073 1019 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 PTK7Q13308 1070 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 CFAP157Q5JU67 520 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.542e-6■■■□□ 17.8
SSU72-202ENST00000359060 TTC39CQ8N584 583 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 C12orf50Q8NA57 414 aaPredicted RBP11.69□□□□□ -0.54
SSU72-202ENST00000359060 PCYT2Q99447 389 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 HAPLN2Q9GZV7 340 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 KITP10721 976 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 MCF2P10911 925 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 CLNS1AP54105 237 aaKnown RBP11.69□□□□□ -0.54
SSU72-202ENST00000359060 AP1B1Q10567 949 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 ZNF268Q14587 947 aaPredicted RBP11.69□□□□□ -0.54
SSU72-202ENST00000359060 PLPPR4Q7Z2D5 763 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 RIBC1Q8N443 379 aaPredicted RBP11.69□□□□□ -0.54
SSU72-202ENST00000359060 C1orf127Q8N9H9 656 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 CDKL2Q92772 493 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 PAFAH2Q99487 392 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 HERPUD2Q9BSE4 406 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 TRIM55Q9BYV6 548 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 TXNRD2Q9NNW7 524 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.69□□□□□ -0.54
SSU72-202ENST00000359060 SHOC2Q9UQ13 582 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 ANKRD31Q8N7Z5 1873 aa11.69□□□□□ -0.54
SSU72-202ENST00000359060 ARF4P18085 180 aaPredicted RBP11.68□□□□□ -0.54
SSU72-202ENST00000359060 ZNF200P98182 395 aaPredicted RBP11.68□□□□□ -0.54
SSU72-202ENST00000359060 GRIK4Q16099 956 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 DGKDQ16760 1214 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 KYAT1Q16773 422 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 MAP1SQ66K74 1059 aaPredicted RBP11.68□□□□□ -0.54
SSU72-202ENST00000359060 ALLCQ8N6M5 410 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 GLIS1Q8NBF1 620 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 STMN2Q93045 179 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 MINDY3Q9H8M7 445 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 BOLA3Q53S33 107 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 DSTYKQ6XUX3 929 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 HACE1Q8IYU2 909 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 SEC14L1Q92503 715 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 CENPTQ96BT3 561 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 ASB7Q9H672 318 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 CYP3A43Q9HB55 503 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 TMEM51Q9NW97 253 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 PHTF1Q9UMS5 762 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 H0Y3Z8 333 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 PDHXO00330 501 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 IGF2BP3O00425 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
SSU72-202ENST00000359060 CD48P09326 243 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 LRRC38Q5VT99 294 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 GRAMD1AQ96CP6 724 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 LBHD1Q9BQE6 289 aaPredicted RBP11.68□□□□□ -0.54
SSU72-202ENST00000359060 CNTNAP2Q9UHC6 1331 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 LRCH4O75427 683 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 DCTN3O75935 186 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 PAEPP09466 180 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 STIP1P31948 543 aaKnown RBP11.68□□□□□ -0.54
SSU72-202ENST00000359060 RPL22P35268 128 aaKnown RBP11.68□□□□□ -0.54
SSU72-202ENST00000359060 GNL1P36915 607 aaPredicted RBP11.68□□□□□ -0.54
SSU72-202ENST00000359060 ELK3P41970 407 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 STILQ15468 1287 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 DCAF6Q58WW2 860 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 TTC16Q8NEE8 873 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 SREK1Q8WXA9 508 aaKnown RBP11.68□□□□□ -0.54
SSU72-202ENST00000359060 AGAP3Q96P47 875 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 PDLIM7Q9NR12 457 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 PAK5Q9P286 719 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 ZFP69BQ9UJL9 534 aa11.68□□□□□ -0.54
SSU72-202ENST00000359060 CFAP69A5D8W1 941 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 SNX3O60493 162 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 CYP2B6P20813 491 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 ITIH4Q14624 930 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 FAM131BQ86XD5 332 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 APPL2Q8NEU8 664 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 MAGEB18Q96M61 343 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 OSBPL7Q9BZF2 842 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 UBN1Q9NPG3 1134 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 KLHL8Q9P2G9 620 aaPredicted RBP11.67□□□□□ -0.54
SSU72-202ENST00000359060 KAT6AQ92794 2004 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 KRT38O76015 456 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 FSBPO95073 299 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 PIGRP01833 764 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 ERBB2P04626 1255 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 CTSHP09668 335 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 PCK1P35558 622 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 GHRHRQ02643 423 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 TAF5Q15542 800 aa11.67□□□□□ -0.54
SSU72-202ENST00000359060 NOTUMQ6P988 496 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms