RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 SCTRP47872 440 aa11.58□□□□□ -0.56
COL11A1-202ENST00000358392 MTFR1Q15390 333 aa11.58□□□□□ -0.56
COL11A1-202ENST00000358392 BNC2Q6ZN30 1099 aaPredicted RBP11.58□□□□□ -0.56
COL11A1-202ENST00000358392 MTDHQ86UE4 582 aaKnown RBP11.58□□□□□ -0.56
COL11A1-202ENST00000358392 RTKN2Q8IZC4 609 aa11.58□□□□□ -0.56
COL11A1-202ENST00000358392 TTC39CQ8N584 583 aa11.58□□□□□ -0.56
COL11A1-202ENST00000358392 TDRD5Q8NAT2 981 aaKnown RBP11.58□□□□□ -0.56
COL11A1-202ENST00000358392 CCSER1Q9C0I3 900 aa11.58□□□□□ -0.56
COL11A1-202ENST00000358392 CTNNAL1Q9UBT7 734 aa11.58□□□□□ -0.56
COL11A1-202ENST00000358392 MMP10P09238 476 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 HARS2P49590 506 aaKnown RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 VAC14Q08AM6 782 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 KRR1Q13601 381 aaKnown RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 SETD3Q86TU7 594 aaPredicted RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 PAIP1Q9H074 479 aaKnown RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 VIPAS39Q9H9C1 493 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 COPS7BQ9H9Q2 264 aaPredicted RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 UVRAGQ9P2Y5 699 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 TRPC4Q9UBN4 977 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 MINPP1Q9UNW1 487 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 GOLGA8TH3BQL2 631 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 NUP107P57740 925 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 SEZ6Q53EL9 994 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 MED8Q96G25 268 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 TMEM120AQ9BXJ8 343 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 RMND5AQ9H871 391 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 SCUBE2Q9NQ36 999 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 ABI2Q9NYB9 513 aaPredicted RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 PPIEQ9UNP9 301 aaKnown RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 SLC16A3O15427 465 aaKnown RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 CNOT3O75175 753 aaKnown RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 SRGNP10124 158 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 IL12RB1P42701 662 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 NAB2Q15742 525 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 OTUD3Q5T2D3 398 aaPredicted RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 AGAP9Q5VTM2 703 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 PDPK2PQ6A1A2 396 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 MB21D2Q8IYB1 491 aaPredicted RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 STKLD1Q8NE28 680 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 FAM45AQ8TCE6 357 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 MASTLQ96GX5 879 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 FANCEQ9HB96 536 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 DNAJC16Q9Y2G8 782 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 ANKARQ7Z5J8 1434 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 ZNF839A8K0R7 811 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 ITGB6P18564 788 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 SNX30Q5VWJ9 437 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 NECAB2Q7Z6G3 386 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 LDHDQ86WU2 507 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 GATAD2AQ86YP4 633 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 ZSWIM2Q8NEG5 633 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 KRT35Q92764 455 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 ERP44Q9BS26 406 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 TUFT1Q9NNX1 390 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 STK39Q9UEW8 545 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 CYP27B1O15528 508 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 PSTPIP1O43586 416 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 BAIAP3O94812 1187 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 EPHA10Q5JZY3 1008 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 ZMYND8Q9ULU4 1186 aaPredicted RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 SCAF8Q9UPN6 1271 aaKnown RBP11.57□□□□□ -0.56
COL11A1-202ENST00000358392 MROH7-TTC4A0A0A0MT08 1334 aa11.57□□□□□ -0.56
COL11A1-202ENST00000358392 PDXKO00764 312 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 KATNA1O75449 491 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 STAU1O95793 577 aaKnown RBP11.56□□□□□ -0.56
COL11A1-202ENST00000358392 NOS3P29474 1203 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 AQP5P55064 265 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 CORO7P57737 925 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 RAD9BQ6WBX8 426 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 CYP4Z1Q86W10 505 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 TRIM39Q9HCM9 518 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 KLK14Q9P0G3 267 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 CPDO75976 1380 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 ATP6AP1LQ52LC2 224 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 FAM228AQ86W67 206 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 MAP10Q9P2G4 905 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 MRPL42Q9Y6G3 142 aaKnown RBP11.56□□□□□ -0.56
COL11A1-202ENST00000358392 NPC1L1Q9UHC9 1359 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 HEG1Q9ULI3 1381 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 PLEKHG1Q9ULL1 1385 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 HLA-DRAP01903 254 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 FGFR3P22607 806 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 HMGCS2P54868 508 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 STX5Q13190 355 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 DDR2Q16832 855 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 C11orf63Q6NUN7 778 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 UGT3A1Q6NUS8 523 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 SUGP1Q8IWZ8 645 aaKnown RBP11.56□□□□□ -0.56
COL11A1-202ENST00000358392 USP38Q8NB14 1042 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 APOL2Q9BQE5 337 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 ISCUQ9H1K1 167 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 DUSP12Q9UNI6 340 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 SLC9A8Q9Y2E8 581 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 ZNF608Q9ULD9 1512 aaPredicted RBP11.56□□□□□ -0.56
COL11A1-202ENST00000358392 ITIH6Q6UXX5 1313 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 BGNP21810 368 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 KCNT1Q5JUK3 1230 aa11.56□□□□□ -0.56
COL11A1-202ENST00000358392 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL11A1-202ENST00000358392 FBXO36Q8NEA4 188 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms