RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 AGPAT1Q99943 283 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 TMEM30AQ9NV96 361 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 DZANK1Q9NVP4 752 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 CLDND1Q9NY35 253 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 ANAPC1Q9H1A4 1944 aa16.12■□□□□ 0.17
TPM1-206ENST00000358278 RFPL2O75678 378 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 BEST1O76090 585 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 GLP2RO95838 553 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 ATF6P18850 670 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 GPR15P49685 360 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 EPHB3P54753 998 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 FMO1Q01740 532 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 PDE4CQ08493 712 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 KCNC3Q14003 757 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 VEPH1Q14D04 833 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 CCDC85BQ15834 202 aaPredicted RBP16.11■□□□□ 0.17
TPM1-206ENST00000358278 SDHAF4Q5VUM1 108 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 DENND1BQ6P3S1 775 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 VPS36Q86VN1 386 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 ELMOD1Q8N336 334 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 SFXN1Q9H9B4 322 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 CSNK1G1Q9HCP0 422 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 XPO1O14980 1071 aaKnown RBP16.11■□□□□ 0.17
TPM1-206ENST00000358278 ZMYND10O75800 440 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 TNFAIP3P21580 790 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 GSDMDP57764 484 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 TAF12Q16514 161 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 PKDCCQ504Y2 493 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 HGSNATQ68CP4 663 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 TRIM72Q6ZMU5 477 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 ZNF571Q7Z3V5 609 aaPredicted RBP16.11■□□□□ 0.17
TPM1-206ENST00000358278 STKLD1Q8NE28 680 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 GPR152Q8TDT2 470 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 GIPC2Q8TF65 315 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 C8orf48Q96LL4 319 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 PANX2Q96RD6 677 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 ZDHHC7Q9NXF8 308 aa16.11■□□□□ 0.17
TPM1-206ENST00000358278 SPTBN5Q9NRC6 3674 aaKnown RBP16.1■□□□□ 0.17
TPM1-206ENST00000358278 CCL16O15467 120 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 LSM8O95777 96 aaKnown RBP16.1■□□□□ 0.17
TPM1-206ENST00000358278 PLEKP08567 350 aaPredicted RBP16.1■□□□□ 0.17
TPM1-206ENST00000358278 HNRNPA1P09651 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
TPM1-206ENST00000358278 CHRNB2P17787 502 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 HOXA9P31269 272 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 ADAM15Q13444 863 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 SKIV2LQ15477 1246 aaKnown RBP16.1■□□□□ 0.17
TPM1-206ENST00000358278 WDR59Q6PJI9 974 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 TMEM184AQ6ZMB5 413 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 PIGZQ86VD9 579 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 TMEM35BQ8NCS4 154 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 C1orf131Q8NDD1 294 aaKnown RBP16.1■□□□□ 0.17
TPM1-206ENST00000358278 ZMIZ2Q8NF64 920 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 PPM1EQ8WY54 764 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 NOX5Q96PH1 765 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 LHX5Q9H2C1 402 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 DEF6Q9H4E7 631 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 PNPLA8Q9NP80 782 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 ST7Q9NRC1 585 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 ARHGAP20Q9P2F6 1191 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 NOTCH4Q99466 2003 aa16.1■□□□□ 0.17
TPM1-206ENST00000358278 TULP2O00295 520 aa16.09■□□□□ 0.17
TPM1-206ENST00000358278 XYLBO75191 536 aa16.09■□□□□ 0.17
TPM1-206ENST00000358278 GPD2P43304 727 aa16.09■□□□□ 0.17
TPM1-206ENST00000358278 PLA2G4AP47712 749 aa16.09■□□□□ 0.17
TPM1-206ENST00000358278 IFRD2Q12894 506 aaPredicted RBP16.09■□□□□ 0.17
TPM1-206ENST00000358278 DENND5BQ6ZUT9 1274 aa16.09■□□□□ 0.17
TPM1-206ENST00000358278 CCDC186Q7Z3E2 898 aa16.09■□□□□ 0.17
TPM1-206ENST00000358278 ITIH5Q86UX2 942 aa16.09■□□□□ 0.17
TPM1-206ENST00000358278 PABPC5Q96DU9 382 aaKnown RBP16.09■□□□□ 0.17
TPM1-206ENST00000358278 SPATA17Q96L03 361 aa16.09■□□□□ 0.17
TPM1-206ENST00000358278 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.09■□□□□ 0.17
TPM1-206ENST00000358278 CCDC195A0A1B0GUA6 201 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 FAM170AA1A519 330 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 TBX10O75333 385 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 RGS7P49802 495 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 SLC5A3P53794 718 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 NOMO3P69849 1222 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 CTC1Q2NKJ3 1217 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 RARS2Q5T160 578 aaKnown RBP16.08■□□□□ 0.17
TPM1-206ENST00000358278 NAA35Q5VZE5 725 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 ANKRD54Q6NXT1 300 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 NUP93Q8N1F7 819 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 C12orf76Q8N812 135 aaPredicted RBP16.08■□□□□ 0.17
TPM1-206ENST00000358278 SLC35F5Q8WV83 523 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 CEP295NLQ96MC4 621 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 ZNF512Q96ME7 567 aaPredicted RBP16.08■□□□□ 0.17
TPM1-206ENST00000358278 SYT11Q9BT88 431 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 MAGED2Q9UNF1 606 aaPredicted RBP16.08■□□□□ 0.17
TPM1-206ENST00000358278 ASB3Q9Y575 518 aa16.08■□□□□ 0.17
TPM1-206ENST00000358278 SLC38A8A6NNN8 435 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 CSH1P0DML2 217 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 CSH2P0DML3 217 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 HOXB8P17481 243 aaPredicted RBP16.08■□□□□ 0.16
TPM1-206ENST00000358278 CDH5P33151 784 aaPredicted RBP16.08■□□□□ 0.16
TPM1-206ENST00000358278 EIF4A3P38919 411 aaKnown RBP16.08■□□□□ 0.16
TPM1-206ENST00000358278 CDK17Q00537 523 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 PDCLQ13371 301 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 PMF1Q6P1K2 205 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 TMC5Q6UXY8 1006 aa16.08■□□□□ 0.16
TPM1-206ENST00000358278 GPRIN1Q7Z2K8 1008 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms