RNA–Protein interactions for RNA: ENST00000357857.14

CLN3-204, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-204ENST00000357857 CDR1P51861 262 aa19.66■□□□□ 0.74
CLN3-204ENST00000357857 OGDHQ02218 1023 aa19.66■□□□□ 0.74
CLN3-204ENST00000357857 ZNF252P-AS1Q0IIN9 211 aa19.66■□□□□ 0.74
CLN3-204ENST00000357857 PIGHQ14442 188 aaPredicted RBP19.66■□□□□ 0.74
CLN3-204ENST00000357857 OLFML1Q6UWY5 402 aa19.66■□□□□ 0.74
CLN3-204ENST00000357857 TMCO2Q7Z6W1 182 aaPredicted RBP19.66■□□□□ 0.74
CLN3-204ENST00000357857 CTAGE6Q86UF2 777 aa19.66■□□□□ 0.74
CLN3-204ENST00000357857 CTAGE4Q8IX94 777 aa19.66■□□□□ 0.74
CLN3-204ENST00000357857 FNIP1Q8TF40 1166 aa19.66■□□□□ 0.74
CLN3-204ENST00000357857 KRT35Q92764 455 aa19.66■□□□□ 0.74
CLN3-204ENST00000357857 TMLHEQ9NVH6 421 aa19.66■□□□□ 0.74
CLN3-204ENST00000357857 CTIFO43310 598 aaKnown RBP19.65■□□□□ 0.74
CLN3-204ENST00000357857 LCP1P13796 627 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 FGFR3P22607 806 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 MAP3K7CLP57077 242 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 SLC6A3Q01959 620 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 FPGSQ05932 587 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 CFAP221Q4G0U5 840 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 OTOP2Q7RTS6 562 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 LRRTM3Q86VH5 581 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 TMEM173Q86WV6 379 aaPredicted RBP19.65■□□□□ 0.74
CLN3-204ENST00000357857 CEP57Q86XR8 500 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 SCUBE3Q8IX30 993 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 NIPA2Q8N8Q9 360 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 KCTD13Q8WZ19 329 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 ALG3Q92685 438 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 BADQ92934 168 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 MS4A14Q96JA4 679 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 SMOQ99835 787 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 CARD9Q9H257 536 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 RC3H2Q9HBD1 1191 aaKnown RBP19.65■□□□□ 0.74
CLN3-204ENST00000357857 USTQ9Y2C2 406 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 PCDHA3Q9Y5H8 950 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 EFCAB8A8MWE9 144 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 CEP104O60308 925 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 PSMA2P25787 234 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 MARCKSL1P49006 195 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 PEX5P50542 639 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 DCAF12L1Q5VU92 463 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 CMTR2Q8IYT2 770 aaKnown RBP19.65■□□□□ 0.74
CLN3-204ENST00000357857 C7orf61Q8IZ16 206 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 EMC1Q8N766 993 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 BCL7CQ8WUZ0 217 aaPredicted RBP19.65■□□□□ 0.74
CLN3-204ENST00000357857 PIWIL1Q96J94 861 aaKnown RBP19.65■□□□□ 0.74
CLN3-204ENST00000357857 ZCWPW1Q9H0M4 648 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 EHD2Q9NZN4 543 aa19.65■□□□□ 0.74
CLN3-204ENST00000357857 PATJQ8NI35 1801 aa19.64■□□□□ 0.74
CLN3-204ENST00000357857 FGBP02675 491 aa19.64■□□□□ 0.73
CLN3-204ENST00000357857 SCNN1AP37088 669 aa19.64■□□□□ 0.73
CLN3-204ENST00000357857 RNASE9P60153 205 aaKnown RBP19.64■□□□□ 0.73
CLN3-204ENST00000357857 MRPL58Q14197 206 aaKnown RBP19.64■□□□□ 0.73
CLN3-204ENST00000357857 SPOUT1Q5T280 376 aaKnown RBP19.64■□□□□ 0.73
CLN3-204ENST00000357857 ZNF280DQ6N043 979 aa19.64■□□□□ 0.73
CLN3-204ENST00000357857 C4orf50Q6ZRC1 276 aa19.64■□□□□ 0.73
CLN3-204ENST00000357857 C16orf59Q7L2K0 433 aa19.64■□□□□ 0.73
CLN3-204ENST00000357857 ZNF572Q7Z3I7 529 aaPredicted RBP19.64■□□□□ 0.73
CLN3-204ENST00000357857 DCP1BQ8IZD4 617 aaKnown RBP19.64■□□□□ 0.73
CLN3-204ENST00000357857 ABHD8Q96I13 439 aa19.64■□□□□ 0.73
CLN3-204ENST00000357857 RPGRIP1Q96KN7 1286 aa19.64■□□□□ 0.73
CLN3-204ENST00000357857 LRRC4Q9HBW1 653 aa19.64■□□□□ 0.73
CLN3-204ENST00000357857 SMARCAL1Q9NZC9 954 aa19.64■□□□□ 0.73
CLN3-204ENST00000357857 TMEM59LQ9UK28 342 aa19.64■□□□□ 0.73
CLN3-204ENST00000357857 KIAA1671Q9BY89 1806 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 ZBBXA8MT70 800 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 BDNFP23560 247 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 CACNA2D1P54289 1103 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 ADIGQ0VDE8 80 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 BTG3Q14201 252 aaPredicted RBP19.63■□□□□ 0.73
CLN3-204ENST00000357857 CTXN3Q4LDR2 81 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 DAB2IPQ5VWQ8 1189 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 CC2D1AQ6P1N0 951 aaPredicted RBP19.63■□□□□ 0.73
CLN3-204ENST00000357857 SPATA2LQ8IUW3 424 aaPredicted RBP19.63■□□□□ 0.73
CLN3-204ENST00000357857 RASGEF1CQ8N431 466 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 ZMIZ2Q8NF64 920 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 GOLGA1Q92805 767 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 B3GALT6Q96L58 329 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 RHOBTB2Q9BYZ6 727 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 UBXN6Q9BZV1 441 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 CSNK1G1Q9HCP0 422 aa19.63■□□□□ 0.73
CLN3-204ENST00000357857 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.63■□□□□ 0.73
CLN3-204ENST00000357857 OR6C75A6NL08 312 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 F8VP50 259 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 PSTPIP1O43586 416 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 GRAP2O75791 330 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 OR4Q2P0C623 313 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 GPD1P21695 349 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 SSR1P43307 286 aaKnown RBP19.62■□□□□ 0.73
CLN3-204ENST00000357857 RWDD2BP57060 319 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 TAS2R40P59535 323 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 SLC39A12Q504Y0 691 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 KCNT2Q6UVM3 1135 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 ZNF365Q70YC5 407 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 SLC26A9Q7LBE3 791 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 RHOT1Q8IXI2 618 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 ACTRT1Q8TDG2 376 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 CLEC4CQ8WTT0 213 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 KCNK16Q96T55 309 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 TMEM30AQ9NV96 361 aa19.62■□□□□ 0.73
CLN3-204ENST00000357857 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.62■□□□□ 0.73
CLN3-204ENST00000357857 V9GYY5 206 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms