RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ALG6Q9Y672 507 aa19.13■□□□□ 0.65
SMARCD3-202ENST00000356800 MAP3K7CLP57077 242 aa19.12■□□□□ 0.65
SMARCD3-202ENST00000356800 RSPO2Q6UXX9 243 aaPredicted RBP19.12■□□□□ 0.65
SMARCD3-202ENST00000356800 PEX26Q7Z412 305 aa19.12■□□□□ 0.65
SMARCD3-202ENST00000356800 HERC6Q8IVU3 1022 aa19.12■□□□□ 0.65
SMARCD3-202ENST00000356800 CEP112Q8N8E3 955 aa19.12■□□□□ 0.65
SMARCD3-202ENST00000356800 MCEEQ96PE7 176 aa19.12■□□□□ 0.65
SMARCD3-202ENST00000356800 KCNK16Q96T55 309 aa19.12■□□□□ 0.65
SMARCD3-202ENST00000356800 CYLDQ9NQC7 956 aa19.12■□□□□ 0.65
SMARCD3-202ENST00000356800 SLC4A7Q9Y6M7 1214 aa19.12■□□□□ 0.65
SMARCD3-202ENST00000356800 CCDC85CA6NKD9 419 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 SIGLEC16A6NMB1 481 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 PAPSS1O43252 624 aaPredicted RBP19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 BDNFP23560 247 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 OGDHQ02218 1023 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 ZNF252P-AS1Q0IIN9 211 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 MAPRE1Q15691 268 aaKnown RBP19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 SLC39A12Q504Y0 691 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 ZNF280DQ6N043 979 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 PRSS55Q6UWB4 352 aaPredicted RBP19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 SCUBE3Q8IX30 993 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 MNS1Q8NEH6 495 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 JOSD2Q8TAC2 188 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 SMARCD1Q96GM5 515 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 HSFY1Q96LI6 401 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 LBHD1Q9BQE6 289 aaPredicted RBP19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 CSNK1G1Q9HCP0 422 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 OR6C75A6NL08 312 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 HHLA1C9JL84 531 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 CES2O00748 559 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 SRGAP2O75044 1071 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 CAPN15O75808 1086 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 COMTP21964 271 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 RPS6KA1Q15418 735 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 USP41Q3LFD5 358 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 RASIP1Q5U651 963 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 OR6B2Q6IFH4 312 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 OLFML1Q6UWY5 402 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 HES6Q96HZ4 224 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 SLC9A7Q96T83 725 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 ZBED2Q9BTP6 218 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 SELENOOQ9BVL4 669 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 METTL5Q9NRN9 209 aaKnown RBP19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 CHST7Q9NS84 486 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 SPG21Q9NZD8 308 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 INSL6Q9Y581 213 aa19.11■□□□□ 0.65
SMARCD3-202ENST00000356800 MYO1FO00160 1098 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 KRT3P12035 628 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 LCP1P13796 627 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 ATP2A2P16615 1042 aaKnown RBP19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 RFC1P35251 1148 aaPredicted RBP19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 SLC8A3P57103 927 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 TAP1Q03518 808 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 FAM102AQ5T9C2 384 aaPredicted RBP19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 ANKS3Q6ZW76 656 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 DCP1BQ8IZD4 617 aaKnown RBP19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 CLEC4CQ8WTT0 213 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 KCTD13Q8WZ19 329 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 KHSRPQ92945 711 aaKnown RBP eCLIP19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 MIS12Q9H081 205 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 RNF14Q9UBS8 474 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 AMFRQ9UKV5 643 aa19.1■□□□□ 0.65
SMARCD3-202ENST00000356800 EFCAB8A8MWE9 144 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 H7C4K7 107 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 PROSCO94903 275 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 ACADSBP45954 432 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 CKAP4Q07065 602 aaKnown RBP19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 TAF5Q15542 800 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 TRNP1Q6NT89 227 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 DCUN1D2Q6PH85 259 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 C4orf50Q6ZRC1 276 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 GPRIN1Q7Z2K8 1008 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 CREG2Q8IUH2 290 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 SPATA2LQ8IUW3 424 aaPredicted RBP19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 FIBCD1Q8N539 461 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 EMC1Q8N766 993 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 PHOSPHO2Q8TCD6 241 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 SP7Q8TDD2 431 aaPredicted RBP19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 COG1Q8WTW3 980 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 CD101Q93033 1021 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 TMEM169Q96HH4 297 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 PSMB7Q99436 277 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 RAD9AQ99638 391 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 TMEM59LQ9UK28 342 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 PLXNA4Q9HCM2 1894 aa19.09■□□□□ 0.65
SMARCD3-202ENST00000356800 LCHNA4D1U4 455 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 ZNF185O15231 689 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 TADA3O75528 432 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 SOD2P04179 222 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 CYP2F1P24903 491 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 DNA2P51530 1060 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 SNX16P57768 344 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 SLC6A3Q01959 620 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 ADCY1Q08828 1119 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 ADIGQ0VDE8 80 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 DAB2IPQ5VWQ8 1189 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 LRRN4CLQ8ND94 238 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 RIN2Q8WYP3 895 aaPredicted RBP19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 PIK3R5Q8WYR1 880 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 CLP1Q92989 425 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms