RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 LCP1P13796 627 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 ALDH7A1P49419 539 aaKnown RBP14.34□□□□□ -0.11
HOXA1-202ENST00000355633 MAP3K7CLP57077 242 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 OGDHQ02218 1023 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 ZNF252P-AS1Q0IIN9 211 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 FAM117BQ6P1L5 589 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 CEP57Q86XR8 500 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 FNIP1Q8TF40 1166 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 ZNF689Q96CS4 500 aaPredicted RBP14.34□□□□□ -0.11
HOXA1-202ENST00000355633 SMARCD1Q96GM5 515 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 MS4A14Q96JA4 679 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 CARD9Q9H257 536 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 CWH43Q9H720 699 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 EHD2Q9NZN4 543 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 USTQ9Y2C2 406 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 PCDHA3Q9Y5H8 950 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 PAPSS1O43252 624 aaPredicted RBP14.34□□□□□ -0.11
HOXA1-202ENST00000355633 PSMA2P25787 234 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 MARCKSL1P49006 195 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 SLC6A3Q01959 620 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 PPIGQ13427 754 aaKnown RBP eCLIP14.34□□□□□ -0.11
HOXA1-202ENST00000355633 VARS2Q5ST30 1063 aaKnown RBP14.34□□□□□ -0.11
HOXA1-202ENST00000355633 OLFML1Q6UWY5 402 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 OTOP2Q7RTS6 562 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 TMCO2Q7Z6W1 182 aaPredicted RBP14.34□□□□□ -0.11
HOXA1-202ENST00000355633 LRRTM3Q86VH5 581 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 EMC1Q8N766 993 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 NIPA2Q8N8Q9 360 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 KCTD13Q8WZ19 329 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 ALG3Q92685 438 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 PIWIL1Q96J94 861 aaKnown RBP14.34□□□□□ -0.11
HOXA1-202ENST00000355633 RPGRIP1Q96KN7 1286 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 TMLHEQ9NVH6 421 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 SMARCAL1Q9NZC9 954 aa14.34□□□□□ -0.11
HOXA1-202ENST00000355633 FGFR3P22607 806 aa14.33□□□□□ -0.12
HOXA1-202ENST00000355633 PEX5P50542 639 aa14.33□□□□□ -0.12
HOXA1-202ENST00000355633 RNASE9P60153 205 aaKnown RBP14.33□□□□□ -0.12
HOXA1-202ENST00000355633 SPOUT1Q5T280 376 aaKnown RBP14.33□□□□□ -0.12
HOXA1-202ENST00000355633 DCAF12L1Q5VU92 463 aa14.33□□□□□ -0.12
HOXA1-202ENST00000355633 DAB2IPQ5VWQ8 1189 aa14.33□□□□□ -0.12
HOXA1-202ENST00000355633 TMEM173Q86WV6 379 aaPredicted RBP14.33□□□□□ -0.12
HOXA1-202ENST00000355633 UBXN4Q92575 508 aa14.33□□□□□ -0.12
HOXA1-202ENST00000355633 GOLGA1Q92805 767 aa14.33□□□□□ -0.12
HOXA1-202ENST00000355633 BADQ92934 168 aa14.33□□□□□ -0.12
HOXA1-202ENST00000355633 SMOQ99835 787 aa14.33□□□□□ -0.12
HOXA1-202ENST00000355633 LRRC4Q9HBW1 653 aa14.33□□□□□ -0.12
HOXA1-202ENST00000355633 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.33□□□□□ -0.12
HOXA1-202ENST00000355633 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.33□□□□□ -0.12
HOXA1-202ENST00000355633 V9GYY5 206 aaPredicted RBP14.33□□□□□ -0.12
HOXA1-202ENST00000355633 MKI67P46013 3256 aaKnown RBP14.33□□□□□ -0.12
HOXA1-202ENST00000355633 BDNFP23560 247 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 SSR1P43307 286 aaKnown RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 RWDD2BP57060 319 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 FPGSQ05932 587 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 ADIGQ0VDE8 80 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 CTXN3Q4LDR2 81 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 TEX35Q5T0J7 233 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 ZNF280DQ6N043 979 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 CC2D1AQ6P1N0 951 aaPredicted RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 C4orf50Q6ZRC1 276 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 ZNF572Q7Z3I7 529 aaPredicted RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 SPATA2LQ8IUW3 424 aaPredicted RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 RHOT1Q8IXI2 618 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 C7orf61Q8IZ16 206 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 DCP1BQ8IZD4 617 aaKnown RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 RASGEF1CQ8N431 466 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 ACTRT1Q8TDG2 376 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 BCL7CQ8WUZ0 217 aaPredicted RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 RHOBTB2Q9BYZ6 727 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 ZCWPW1Q9H0M4 648 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 RC3H2Q9HBD1 1191 aaKnown RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 CSNK1G1Q9HCP0 422 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 TMEM59LQ9UK28 342 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 NLRC5Q86WI3 1866 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 ZBBXA8MT70 800 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 F8VP50 259 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 PGRMC1O00264 195 aaKnown RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 PSTPIP1O43586 416 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 GRAP2O75791 330 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 FGBP02675 491 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 OR4Q2P0C623 313 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 GPD1P21695 349 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 SCNN1AP37088 669 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 CACNA2D1P54289 1103 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 ZNF211Q13398 564 aaPredicted RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 MRPL58Q14197 206 aaKnown RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 BTG3Q14201 252 aaPredicted RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 RSRC2Q7L4I2 434 aaKnown RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 SLC26A9Q7LBE3 791 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 CMTR2Q8IYT2 770 aaKnown RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 SIX6OS1Q8N1H7 587 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 ZMIZ2Q8NF64 920 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 RNPC3Q96LT9 517 aaKnown RBP14.32□□□□□ -0.12
HOXA1-202ENST00000355633 KCNK16Q96T55 309 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 TMEM30AQ9NV96 361 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 PTPRDP23468 1912 aa14.32□□□□□ -0.12
HOXA1-202ENST00000355633 PTPRSQ13332 1948 aa14.31□□□□□ -0.12
HOXA1-202ENST00000355633 OR6C75A6NL08 312 aa14.31□□□□□ -0.12
HOXA1-202ENST00000355633 C2CD4BA6NLJ0 364 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms