RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 PTK7Q13308 1070 aa8.32□□□□□ -1.08
SCN8A-201ENST00000354534 ARHGEF7Q14155 803 aa8.32□□□□□ -1.08
SCN8A-201ENST00000354534 CACHD1Q5VU97 1274 aa8.32□□□□□ -1.08
SCN8A-201ENST00000354534 TRIM48Q8IWZ4 208 aa8.32□□□□□ -1.08
SCN8A-201ENST00000354534 GIMAP8Q8ND71 665 aaPredicted RBP8.32□□□□□ -1.08
SCN8A-201ENST00000354534 RMND5AQ9H871 391 aa8.32□□□□□ -1.08
SCN8A-201ENST00000354534 FBXO28Q9NVF7 368 aa8.32□□□□□ -1.08
SCN8A-201ENST00000354534 OR6A2O95222 327 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 AGTP01019 485 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 OTUD3Q5T2D3 398 aaPredicted RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 KBTBD7Q8WVZ9 684 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 ABCB10Q9NRK6 738 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 STX11O75558 287 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 PLCG1P19174 1290 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 P3H1Q32P28 736 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 GPATCH4Q5T3I0 446 aaKnown RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 ZCCHC8Q6NZY4 707 aaKnown RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 POC5Q8NA72 575 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 URGCPQ8TCY9 931 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 EPB41L1Q9H4G0 881 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 SH3GLB2Q9NR46 395 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 LDHAP00338 332 aaKnown RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 SDC4P31431 198 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 AVPR1AP37288 418 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 HK2P52789 917 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 STX5Q13190 355 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 BYSLQ13895 437 aaKnown RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 ZFRQ96KR1 1074 aaKnown RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 FAM49AQ9H0Q0 323 aaPredicted RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 RAB6BQ9NRW1 208 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 M0QYV0 167 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 PSMD3O43242 534 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 SCRN1Q12765 414 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 KNOP1Q1ED39 458 aaKnown RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 C5orf22Q49AR2 442 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 ZBTB49Q6ZSB9 765 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 FAM228AQ86W67 206 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 VPS35Q96QK1 796 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 MUC3BQ9H195 1237 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 KLHL11Q9NVR0 708 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 NMRK1Q9NWW6 199 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 COMMD8Q9NX08 183 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 CLDN3O15551 220 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 FAM58BPP0C7Q3 252 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 RAD23AP54725 363 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 LRRC74BQ6ZQY2 392 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 WDR11Q9BZH6 1224 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 SPACA6W5XKT8 324 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 ANO9A1A5B4 782 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 SH3D21A4FU49 640 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 H3BMM5 538 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 TPI1P60174 286 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 RHOT1Q8IXI2 618 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 DAW1Q8N136 415 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 VPS33AQ96AX1 596 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 RNF26Q9BY78 433 aaPredicted RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 CNOT7Q9UIV1 285 aaKnown RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 SLC30A1Q9Y6M5 507 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 SEMA3EO15041 775 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 NOS1APO75052 506 aaPredicted RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 AP1G2O75843 785 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 ATP1A1P05023 1023 aaKnown RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 TWF1Q12792 350 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 TOMM20Q15388 145 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 PERM1Q5SV97 790 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 OOSP2Q86WS3 158 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 MMGT1Q8N4V1 131 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 HPS1Q92902 700 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 KCTD14Q9BQ13 255 aaPredicted RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 SHANK2Q9UPX8 1470 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 CLASP1Q7Z460 1538 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 HSD17B4P51659 736 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 S100A12P80511 92 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 DLG1Q12959 904 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 GCKRQ14397 625 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 IZUMO2Q6UXV1 221 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 TMC4Q7Z404 712 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 EEF1AKMT1Q8WVE0 214 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 OSCP1Q8WVF1 389 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 STAP1Q9ULZ2 295 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 POLR1AO95602 1720 aaPredicted RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 TOP3BO95985 862 aaKnown RBP8.31□□□□□ -1.08
SCN8A-201ENST00000354534 TBCKQ8TEA7 893 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 CAMKK2Q96RR4 588 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 ZSWIM6Q9HCJ5 1215 aa8.31□□□□□ -1.08
SCN8A-201ENST00000354534 TNKSO95271 1327 aa8.3□□□□□ -1.08
SCN8A-201ENST00000354534 KMOO15229 486 aa8.3□□□□□ -1.08
SCN8A-201ENST00000354534 PCNAP12004 261 aa8.3□□□□□ -1.08
SCN8A-201ENST00000354534 CHRM3P20309 590 aa8.3□□□□□ -1.08
SCN8A-201ENST00000354534 GPC3P51654 580 aa8.3□□□□□ -1.08
SCN8A-201ENST00000354534 GRIK3Q13003 919 aa8.3□□□□□ -1.08
SCN8A-201ENST00000354534 ANKRD26P1Q6NSI1 321 aa8.3□□□□□ -1.08
SCN8A-201ENST00000354534 CCDC33Q8N5R6 958 aa8.3□□□□□ -1.08
SCN8A-201ENST00000354534 B3GALNT2Q8NCR0 500 aa8.3□□□□□ -1.08
SCN8A-201ENST00000354534 LSM14AQ8ND56 463 aaKnown RBP8.3□□□□□ -1.08
SCN8A-201ENST00000354534 ZNF668Q96K58 619 aaPredicted RBP8.3□□□□□ -1.08
SCN8A-201ENST00000354534 ADD3Q9UEY8 706 aaKnown RBP8.3□□□□□ -1.08
SCN8A-201ENST00000354534 RNF112Q9ULX5 631 aa8.3□□□□□ -1.08
SCN8A-201ENST00000354534 TIMM8BQ9Y5J9 83 aaPredicted RBP8.3□□□□□ -1.08
SCN8A-201ENST00000354534 TRPC5OSA6NMA1 111 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms