RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 AXIN1O15169 862 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 CLIC2O15247 247 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 YEATS4O95619 227 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 ADRB1P08588 477 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 IFNAR2P48551 515 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 MDH1BQ5I0G3 518 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 PLA2G2CQ5R387 149 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 NELFCDQ8IXH7 590 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 RDH13Q8NBN7 331 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 MYCBPAPQ8TBZ2 947 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 ATP2A3Q93084 1043 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 RNF38Q9H0F5 515 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 XYLT2Q9H1B5 865 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 SMOC1Q9H4F8 434 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 SLC8A2Q9UPR5 921 aa16.95■□□□□ 0.3
PDGFA-201ENST00000354513 UBE4BO95155 1302 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 SDK1Q7Z5N4 2213 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 F8VP50 259 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 CUTAO60888 179 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 ATG13O75143 517 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 TACC1O75410 805 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 DLATP10515 647 aaKnown RBP16.94■□□□□ 0.3
PDGFA-201ENST00000354513 HDCP19113 662 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 CYP2J2P51589 502 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 CYP27A1Q02318 531 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 MESP2Q0VG99 397 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 BMT2Q1RMZ1 405 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 PPM1JQ5JR12 505 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 DENND5BQ6ZUT9 1274 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 STXBP4Q6ZWJ1 553 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 UNC13DQ70J99 1090 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 SYT13Q7L8C5 426 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 CACNA2D4Q7Z3S7 1137 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 SFTPA1Q8IWL2 248 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 CAMKK1Q8N5S9 505 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 TTC16Q8NEE8 873 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 LOXL4Q96JB6 756 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 ZC3H10Q96K80 434 aaKnown RBP16.94■□□□□ 0.3
PDGFA-201ENST00000354513 ZNF518BQ9C0D4 1074 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 DUSP15Q9H1R2 295 aaPredicted RBP16.94■□□□□ 0.3
PDGFA-201ENST00000354513 BLZF1Q9H2G9 400 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 KIAA1586Q9HCI6 787 aa16.94■□□□□ 0.3
PDGFA-201ENST00000354513 ABCA7Q8IZY2 2146 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 ZNF840PA6NDX5 716 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 K7EQS6 105 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 LEFTY2O00292 366 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 TM4SF5O14894 197 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 AKAP3O75969 853 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 STAU1O95793 577 aaKnown RBP16.93■□□□□ 0.3
PDGFA-201ENST00000354513 OAS1P00973 400 aaKnown RBP16.93■□□□□ 0.3
PDGFA-201ENST00000354513 GRIK1P39086 918 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 CASP4P49662 377 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 NOP14P78316 857 aaKnown RBP16.93■□□□□ 0.3
PDGFA-201ENST00000354513 SLC7A9P82251 487 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 DMC1Q14565 340 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 KCNB1Q14721 858 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 PLK5Q496M5 336 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 FBXO43Q4G163 708 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 C12orf56Q8IXR9 622 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 FSIP1Q8NA03 581 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 ELMO3Q96BJ8 720 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 C8orf48Q96LL4 319 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 CEP295NLQ96MC4 621 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 MMS19Q96T76 1030 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 B3GNT5Q9BYG0 378 aa16.93■□□□□ 0.3
PDGFA-201ENST00000354513 CLDN5O00501 218 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 SCAMP3O14828 347 aaKnown RBP16.92■□□□□ 0.3
PDGFA-201ENST00000354513 DCLK1O15075 740 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 CYP17A1P05093 508 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 ZNF806P0C7X5 589 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 LIMK1P53667 647 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 MYL6P60660 151 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 AMPD2Q01433 879 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 CUL4BQ13620 913 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 MAPRE1Q15691 268 aaKnown RBP16.92■□□□□ 0.3
PDGFA-201ENST00000354513 FOXD4L5Q5VV16 416 aaPredicted RBP16.92■□□□□ 0.3
PDGFA-201ENST00000354513 GRAMD1CQ8IYS0 662 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 XXYLT1Q8NBI6 393 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 FOXD4L4Q8WXT5 416 aaPredicted RBP16.92■□□□□ 0.3
PDGFA-201ENST00000354513 CCDC127Q96BQ5 260 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 LRRC27Q9C0I9 530 aa16.92■□□□□ 0.3
PDGFA-201ENST00000354513 TRIM66O15016 1216 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 POLR2DO15514 142 aaKnown RBP16.91■□□□□ 0.3
PDGFA-201ENST00000354513 KLRC4O43908 158 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 CCDC192P0DO97 292 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 HNRNPLP14866 589 aaKnown RBP eCLIP16.91■□□□□ 0.3
PDGFA-201ENST00000354513 PFKLP17858 780 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 PTPN1P18031 435 aaKnown RBP16.91■□□□□ 0.3
PDGFA-201ENST00000354513 TNNI1P19237 187 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 GNL1P36915 607 aaPredicted RBP16.91■□□□□ 0.3
PDGFA-201ENST00000354513 PAQR9Q6ZVX9 377 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 FILIP1Q7Z7B0 1213 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 C12orf40Q86WS4 652 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 IQUBQ8NA54 791 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 OR6B3Q8NGW1 331 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 USP33Q8TEY7 942 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 ZFRQ96KR1 1074 aaKnown RBP16.91■□□□□ 0.3
PDGFA-201ENST00000354513 ZNF396Q96N95 335 aaPredicted RBP16.91■□□□□ 0.3
PDGFA-201ENST00000354513 SDCBP2Q9H190 292 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 SMYD3Q9H7B4 428 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms