RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 MDM2Q00987 491 aaPredicted RBP15.5■□□□□ 0.07
COL17A1-201ENST00000353479 RABGAP1LQ5R372 815 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 KIAA0319LQ8IZA0 1049 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 CARNMT1Q8N4J0 409 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 ETNPPLQ8TBG4 499 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 PDGFCQ9NRA1 345 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 PCDHB5Q9Y5E4 795 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 ANP32DO95626 131 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 PRKAR2AP13861 404 aaKnown RBP15.5■□□□□ 0.07
COL17A1-201ENST00000353479 SDE2Q6IQ49 451 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 HIBCHQ6NVY1 386 aaPredicted RBP15.5■□□□□ 0.07
COL17A1-201ENST00000353479 SH3BP5LQ7L8J4 393 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 AFDNP55196 1824 aaKnown RBP15.5■□□□□ 0.07
COL17A1-201ENST00000353479 MSCO60682 206 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 PPP1R11O60927 126 aaPredicted RBP15.5■□□□□ 0.07
COL17A1-201ENST00000353479 MAFO75444 373 aaPredicted RBP15.5■□□□□ 0.07
COL17A1-201ENST00000353479 GCNT1Q02742 428 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 MMGT1Q8N4V1 131 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 ZNF669Q96BR6 464 aaPredicted RBP15.5■□□□□ 0.07
COL17A1-201ENST00000353479 STIP1P31948 543 aaKnown RBP15.5■□□□□ 0.07
COL17A1-201ENST00000353479 DLG4P78352 724 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 ADIGQ0VDE8 80 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 PTK7Q13308 1070 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 NYAP1Q6ZVC0 841 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 PCMTD2Q9NV79 361 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 MICAL2O94851 1124 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 AGTP01019 485 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 AMHP03971 560 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 C4orf22Q6V702 233 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 ISCUQ9H1K1 167 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 LATS2Q9NRM7 1088 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 RIPK3Q9Y572 518 aa15.5■□□□□ 0.07
COL17A1-201ENST00000353479 TTLL13PA6NNM8 815 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 MYL4P12829 197 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 FNTAP49354 379 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 UGCGQ16739 394 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 PLPPR4Q7Z2D5 763 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 MCOLN2Q8IZK6 566 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 NCLNQ969V3 563 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 FOXP3Q9BZS1 431 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 SLC13A4Q9UKG4 626 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 BTBD19C9JJ37 291 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 FKTNO75072 461 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 ANXA9O76027 345 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 ASS1P00966 412 aaKnown RBP15.49■□□□□ 0.07
COL17A1-201ENST00000353479 OTUD4Q01804 1114 aaKnown RBP15.49■□□□□ 0.07
COL17A1-201ENST00000353479 SH2D3CQ8N5H7 860 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 TSPAN17Q96FV3 270 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 ACTR5Q9H9F9 607 aaPredicted RBP15.49■□□□□ 0.07
COL17A1-201ENST00000353479 HES2Q9Y543 173 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 SMAPO00193 183 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 TMCC1O94876 653 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 HIST1H2AGP0C0S8 130 aaPredicted RBP15.49■□□□□ 0.07
COL17A1-201ENST00000353479 HIST1H2ADP20671 130 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 MAP4P27816 1152 aaKnown RBP15.49■□□□□ 0.07
COL17A1-201ENST00000353479 GUCY1A3Q02108 690 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 FUT2Q10981 343 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 MORF4L2Q15014 288 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 ZRANB3Q5FWF4 1079 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 NT5DC4Q86YG4 428 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 HIST1H2AHQ96KK5 128 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 HIST1H2AJQ99878 128 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 H2AFJQ9BTM1 129 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 GYG2O15488 501 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 HAUS5O94927 633 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 MLH1P40692 756 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 SERPINB9P50453 376 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 ITGB3BPQ13352 177 aaPredicted RBP15.49■□□□□ 0.07
COL17A1-201ENST00000353479 SLC2A14Q8TDB8 520 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 DDI1Q8WTU0 396 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 TSSK1BQ9BXA7 367 aa15.49■□□□□ 0.07
COL17A1-201ENST00000353479 TMEM88BA6NKF7 163 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 MAP3K7O43318 606 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
COL17A1-201ENST00000353479 CAPSQ13938 189 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 ANKRD20A4Q4UJ75 823 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 ANKRD20A8PQ5CZ79 823 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 ANKRD20A2Q5SQ80 823 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 ANKRD20A1Q5TYW2 823 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 SPOCD1Q6ZMY3 1216 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 PPP1R36Q96LQ0 422 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 MRPL9Q9BYD2 267 aaKnown RBP15.48■□□□□ 0.07
COL17A1-201ENST00000353479 L3MBTL1Q9Y468 752 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 SLC4A7Q9Y6M7 1214 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 ROBO3Q96MS0 1386 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 ENDOD1O94919 500 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 EIF4BP23588 611 aaKnown RBP15.48■□□□□ 0.07
COL17A1-201ENST00000353479 AVPR1AP37288 418 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 SCNN1GP51170 649 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 MRPS6P82932 125 aaKnown RBP15.48■□□□□ 0.07
COL17A1-201ENST00000353479 NLRP14Q86W24 1093 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 GBP7Q8N8V2 638 aaPredicted RBP15.48■□□□□ 0.07
COL17A1-201ENST00000353479 TMEM161BQ8NDZ6 487 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 CALML6Q8TD86 181 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 KLF6Q99612 283 aaPredicted RBP15.48■□□□□ 0.07
COL17A1-201ENST00000353479 UPF3AQ9H1J1 476 aaKnown RBP15.48■□□□□ 0.07
COL17A1-201ENST00000353479 TASP1Q9H6P5 420 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 FGFR1OP2Q9NVK5 253 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 ORC6Q9Y5N6 252 aa15.48■□□□□ 0.07
COL17A1-201ENST00000353479 PEX10O60683 326 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms