RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 R3HDM2Q9Y2K5 976 aaKnown RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 ARL2BPQ9Y2Y0 163 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 TRIM17Q9Y577 477 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 CEP83Q9Y592 693 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 RALGAPA2Q2PPJ7 1873 aa9.05□□□□□ -0.96
TRIM55-204ENST00000353317 KIAA0100Q14667 2235 aaKnown RBP9.05□□□□□ -0.96
TRIM55-204ENST00000353317 O00370 1275 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 WEE2P0C1S8 567 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 HOXD10P28358 340 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 GRK4P32298 578 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 CRYBB1P53674 252 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-204ENST00000353317 GCNT1Q02742 428 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 MGAT3Q09327 533 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 ITGA7Q13683 1181 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 PTK6Q13882 451 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 DUOXA2Q1HG44 320 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 ACAD10Q6JQN1 1059 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 ASRGL1Q7L266 308 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 PHLDB2Q86SQ0 1253 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 UBR7Q8N806 425 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 SMG8Q8ND04 991 aaKnown RBP9.04□□□□□ -0.96
TRIM55-204ENST00000353317 CCHCR1Q8TD31 782 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 C18orf25Q96B23 403 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-204ENST00000353317 APOL6Q9BWW8 343 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 PLVAPQ9BX97 442 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 SDCBP2Q9H190 292 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 RXFP1Q9HBX9 757 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 NINJ2Q9NZG7 142 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 KLK14Q9P0G3 267 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 PCDH10Q9P2E7 1040 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 PIN4Q9Y237 131 aaKnown RBP9.04□□□□□ -0.96
TRIM55-204ENST00000353317 C15orf41Q9Y2V0 281 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 MROH7Q68CQ1 1323 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 KPNA6O60684 536 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 TCEA3O75764 348 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 ITGB3P05106 788 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 STX2P32856 288 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 ADCY8P40145 1251 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 RAP1GAPP47736 663 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 CDH8P55286 799 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 CUL2Q13617 745 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 CRYMQ14894 314 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 TRIM71Q2Q1W2 868 aaKnown RBP9.04□□□□□ -0.96
TRIM55-204ENST00000353317 C2CD6Q53TS8 623 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 LLGL2Q6P1M3 1020 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 SLC27A1Q6PCB7 646 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 ALKAL1Q6UXT8 129 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 USP37Q86T82 979 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 SRRM1Q8IYB3 904 aaKnown RBP9.04□□□□□ -0.96
TRIM55-204ENST00000353317 FAM118BQ9BPY3 351 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 TRAIPQ9BWF2 469 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 DCLK3Q9C098 648 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 SENP6Q9GZR1 1112 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-204ENST00000353317 UNC93B1Q9H1C4 597 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 TRPV6Q9H1D0 765 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 SPC25Q9HBM1 224 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 CACNG4Q9UBN1 327 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 NAALADL1Q9UQQ1 740 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 STK38LQ9Y2H1 464 aa9.04□□□□□ -0.96
TRIM55-204ENST00000353317 MGEA5O60502 916 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 GAS8O95995 478 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 UNGP13051 313 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ATF2P15336 505 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 RRM1P23921 792 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 GRM5P41594 1212 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 MSH2P43246 934 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ASPAP45381 313 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 MRPS6P82932 125 aaKnown RBP9.03□□□□□ -0.96
TRIM55-204ENST00000353317 CLEC16AQ2KHT3 1053 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 SCARA5Q6ZMJ2 495 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 DDX27Q96GQ7 796 aaKnown RBP9.03□□□□□ -0.96
TRIM55-204ENST00000353317 RSRC1Q96IZ7 334 aaKnown RBP9.03□□□□□ -0.96
TRIM55-204ENST00000353317 C9orf72Q96LT7 481 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 MAGEB18Q96M61 343 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ACAP3Q96P50 834 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 HEMGNQ9BXL5 484 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 C1orf112Q9NSG2 853 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ANAPC5Q9UJX4 755 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ST3GAL5Q9UNP4 418 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 NEU2Q9Y3R4 380 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ZC3H11AO75152 810 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRIM55-204ENST00000353317 CDH16O75309 829 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 RECQL4O94761 1208 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 KRT19P08727 400 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 TMEM191BP0C7N4 346 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 KRT5P13647 590 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 FOXN2P32314 431 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 SOX4Q06945 474 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-204ENST00000353317 KLF1Q13351 362 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ORC1Q13415 861 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 NAA25Q14CX7 972 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ZBTB6Q15916 424 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ZNF394Q53GI3 561 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 TMEM270Q6UE05 265 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ARHGEF18Q6ZSZ5 1173 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 SYDE1Q6ZW31 735 aaPredicted RBP9.03□□□□□ -0.96
TRIM55-204ENST00000353317 PRUNE1Q86TP1 453 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 SESTD1Q86VW0 696 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ECHDC2Q86YB7 292 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 NME8Q8N427 588 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms