RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ZNF852Q6ZMS4 543 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 PLPPR4Q7Z2D5 763 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 ZNF605Q86T29 641 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 ZNF598Q86UK7 904 aaKnown RBP8.77□□□□□ -1.01
CD44-205ENST00000352818 DEFB124Q8NES8 71 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 ASAP3Q8TDY4 903 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 UBE2Q2Q8WVN8 375 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 SLC39A7Q92504 469 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 LOXL4Q96JB6 756 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 KXD1Q9BQD3 176 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 JPH2Q9BR39 696 aaPredicted RBP8.77□□□□□ -1.01
CD44-205ENST00000352818 EDEM2Q9BV94 578 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 PLA2G2FQ9BZM2 168 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 RNF39Q9H2S5 420 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 ANKZF1Q9H8Y5 726 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 FAM53CQ9NYF3 392 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 ADAMTS1Q9UHI8 967 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 SALL4Q9UJQ4 1053 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 NDRG2Q9UN36 371 aaKnown RBP8.77□□□□□ -1.01
CD44-205ENST00000352818 DOPEY1Q5JWR5 2465 aa8.77□□□□□ -1.01
CD44-205ENST00000352818 IGKV6-21A0A0C4DH24 114 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 TARSL2A2RTX5 802 aaKnown RBP8.76□□□□□ -1.01
CD44-205ENST00000352818 LRRIQ3A6PVS8 624 aaPredicted RBP8.76□□□□□ -1.01
CD44-205ENST00000352818 PYCARD-AS1I3L0S3 204 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 CDX4O14627 284 aaPredicted RBP8.76□□□□□ -1.01
CD44-205ENST00000352818 ENC1O14682 589 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 ZRANB2O95218 330 aaKnown RBP eCLIP8.76□□□□□ -1.01
CD44-205ENST00000352818 PAPSS2O95340 614 aaPredicted RBP8.76□□□□□ -1.01
CD44-205ENST00000352818 LDHAP00338 332 aaKnown RBP8.76□□□□□ -1.01
CD44-205ENST00000352818 GALTP07902 379 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 H2AFZP0C0S5 128 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 TMEM253P0C7T8 217 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 SPATA31D3P0C874 917 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 MCM3P25205 808 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 KLRC1P26715 233 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 TCF7P36402 384 aaPredicted RBP8.76□□□□□ -1.01
CD44-205ENST00000352818 MPLP40238 635 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 CXCL12P48061 93 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 ALDH7A1P49419 539 aaKnown RBP8.76□□□□□ -1.01
CD44-205ENST00000352818 EFNA5P52803 228 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 NTHL1P78549 312 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 ARID5AQ03989 594 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 STRN3Q13033 797 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 PSMD6Q15008 389 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 MEI1Q5TIA1 1274 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 CDCA2Q69YH5 1023 aaPredicted RBP8.76□□□□□ -1.01
CD44-205ENST00000352818 WDR93Q6P2C0 686 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 ZPBP2Q6X784 338 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 SPATA31D4Q6ZUB0 917 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 H2AFVQ71UI9 128 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 CEP68Q76N32 757 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 ENOSF1Q7L5Y1 443 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 ECHDC2Q86YB7 292 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 CBWD2Q8IUF1 395 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 FBXL13Q8NEE6 735 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 LNX1Q8TBB1 728 aaPredicted RBP8.76□□□□□ -1.01
CD44-205ENST00000352818 HELQQ8TDG4 1101 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 TCP11Q8WWU5 503 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 POMGNT1Q8WZA1 660 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 OSBPL9Q96SU4 736 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.76□□□□□ -1.01
CD44-205ENST00000352818 KIFC3Q9BVG8 833 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 TLR10Q9BXR5 811 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 PARD6BQ9BYG5 372 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 AZI2Q9H6S1 392 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 LMAN1LQ9HAT1 526 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 SCUBE2Q9NQ36 999 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 CDH7Q9ULB5 785 aa8.76□□□□□ -1.01
CD44-205ENST00000352818 MYH10P35580 1976 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 LNP1A1A4G5 178 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 GRID2IPA4D2P6 1211 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 ZNF233A6NK53 670 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 TK2O00142 265 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 TEX28O15482 410 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 ERLIN1O75477 346 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 PALMO75781 387 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 CHRNB1P11230 501 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 GCLMP48507 274 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 LIG4P49917 911 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 HADHBP55084 474 aaKnown RBP8.75□□□□□ -1.01
CD44-205ENST00000352818 PFKPQ01813 784 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 GCNT1Q02742 428 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 CAPSQ13938 189 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 PLCB4Q15147 1175 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 CC2D1AQ6P1N0 951 aaPredicted RBP8.75□□□□□ -1.01
CD44-205ENST00000352818 TMCO3Q6UWJ1 677 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 SLFN11Q7Z7L1 901 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 CREG2Q8IUH2 290 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 ARHGEF19Q8IW93 802 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 FAM71AQ8IYT1 594 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 KIAA0319LQ8IZA0 1049 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 CHCHD4Q8N4Q1 142 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 MMGT1Q8N4V1 131 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 LRRC57Q8N9N7 239 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 RDH13Q8NBN7 331 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 ZSWIM2Q8NEG5 633 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 DEPTORQ8TB45 409 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 PSPC1Q8WXF1 523 aaKnown RBP8.75□□□□□ -1.01
CD44-205ENST00000352818 RFFLQ8WZ73 363 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 SHC3Q92529 594 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms