RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ATG2AQ2TAZ0 1938 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 A0A1W2PQC6 194 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 VNN2O95498 520 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 CCDC172P0C7W6 258 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 ADORA2BP29275 332 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 POLR2FP61218 127 aaKnown RBP12.54□□□□□ -0.4
SNCA-202ENST00000345009 ORC1Q13415 861 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 DRAP1Q14919 205 aaPredicted RBP12.54□□□□□ -0.4
SNCA-202ENST00000345009 NR1I3Q14994 352 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 SMAD2Q15796 467 aaKnown RBP12.54□□□□□ -0.4
SNCA-202ENST00000345009 DDR2Q16832 855 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 ARHGAP17Q68EM7 881 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 PDZD4Q76G19 769 aaPredicted RBP12.54□□□□□ -0.4
SNCA-202ENST00000345009 OTOP3Q7RTS5 596 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 GRASPQ7Z6J2 395 aaPredicted RBP12.54□□□□□ -0.4
SNCA-202ENST00000345009 FAM35AQ86V20 835 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.54□□□□□ -0.4
SNCA-202ENST00000345009 FUKQ8N0W3 1084 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 UBR7Q8N806 425 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.54□□□□□ -0.4
SNCA-202ENST00000345009 SHC3Q92529 594 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 SUSD6Q92537 303 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 KAT5Q92993 513 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 ZNF707Q96C28 371 aaPredicted RBP12.54□□□□□ -0.4
SNCA-202ENST00000345009 ACSF2Q96CM8 615 aaPredicted RBP12.54□□□□□ -0.4
SNCA-202ENST00000345009 KCTD12Q96CX2 325 aaKnown RBP12.54□□□□□ -0.4
SNCA-202ENST00000345009 IQCDQ96DY2 449 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 TWNKQ96RR1 684 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 CORO1BQ9BR76 489 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 DUSP16Q9BY84 665 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 ZNF518BQ9C0D4 1074 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 CRISPLD1Q9H336 500 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 SIX2Q9NPC8 291 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 PRKAG3Q9UGI9 489 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 SIK3Q9Y2K2 1263 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 NR2E1Q9Y466 385 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 NME7Q9Y5B8 376 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 ZFP37Q9Y6Q3 630 aaPredicted RBP12.54□□□□□ -0.4
SNCA-202ENST00000345009 NCOR1O75376 2440 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 XIRP2A4UGR9 3374 aa12.54□□□□□ -0.4
SNCA-202ENST00000345009 F8VP50 259 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 CLDN5O00501 218 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 MICAL2O94851 1124 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 RTN3O95197 1032 aaPredicted RBP12.53□□□□□ -0.4
SNCA-202ENST00000345009 CCDC130P13994 396 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 NPR3P17342 541 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 FSHRP23945 695 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 STAT1P42224 750 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 PPP3CCP48454 512 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 CDR1P51861 262 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 CNGA2Q16280 664 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 PPP1R26Q5T8A7 1209 aaPredicted RBP12.53□□□□□ -0.4
SNCA-202ENST00000345009 GJB7Q6PEY0 223 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 NUP93Q8N1F7 819 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 TTC9BQ8N6N2 239 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 ANKRD52Q8NB46 1076 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 ZNF397Q8NF99 534 aaPredicted RBP12.53□□□□□ -0.4
SNCA-202ENST00000345009 GIPC2Q8TF65 315 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 NAP1L5Q96NT1 182 aaPredicted RBP12.53□□□□□ -0.4
SNCA-202ENST00000345009 PHF7Q9BWX1 381 aaPredicted RBP12.53□□□□□ -0.4
SNCA-202ENST00000345009 EDEM3Q9BZQ6 932 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 UBXN6Q9BZV1 441 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 FBXO44Q9H4M3 255 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 AVENQ9NQS1 362 aaPredicted RBP12.53□□□□□ -0.4
SNCA-202ENST00000345009 KRT82Q9NSB4 513 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 COMMD8Q9NX08 183 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 IFNKQ9P0W0 207 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 CEP72Q9P209 647 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 RABGEF1Q9UJ41 708 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 ZMYM5Q9UJ78 669 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 USTQ9Y2C2 406 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 MRPS23Q9Y3D9 190 aaKnown RBP12.53□□□□□ -0.4
SNCA-202ENST00000345009 FHOD1Q9Y613 1164 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 TSC2P49815 1807 aa12.53□□□□□ -0.4
SNCA-202ENST00000345009 FOXN3O00409 490 aaPredicted RBP12.52□□□□□ -0.41
SNCA-202ENST00000345009 TEX33O43247 280 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 THAP12O43422 761 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 SOAT2O75908 522 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 RHOP08100 348 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 MYL4P12829 197 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 ATF6P18850 670 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 CDC25CP30307 473 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 GNA15P30679 374 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 KRT9P35527 623 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 ZNF132P52740 706 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 BCAT1P54687 386 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 SNX16P57768 344 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 APBA1Q02410 837 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 ARHGAP15Q53QZ3 475 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 TJAP1Q5JTD0 557 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 LCLAT1Q6UWP7 414 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 PAQR9Q6ZVX9 377 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 FAM71AQ8IYT1 594 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 SLITRK1Q96PX8 696 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 LPIN3Q9BQK8 851 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
SNCA-202ENST00000345009 GPR88Q9GZN0 384 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
SNCA-202ENST00000345009 CSNK1G1Q9HCP0 422 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms