RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZFATQ9P243 1243 aa17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 SLC45A1Q9Y2W3 748 aa17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 ALG6Q9Y672 507 aa17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 AKT1P31749 480 aa17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 ARL4DP49703 201 aa17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 BYSLQ13895 437 aaKnown RBP17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 THEMIS2Q5TEJ8 643 aa17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 TIGD7Q6NT04 549 aaPredicted RBP17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 TRAIPQ9BWF2 469 aa17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 DMAP1Q9NPF5 467 aaPredicted RBP17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 VPS28Q9UK41 221 aa17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 PLAGL2Q9UPG8 496 aa17.08■□□□□ 0.33
SMARCA4-201ENST00000344626 LRRC37A3O60309 1634 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 TRIM66O15016 1216 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 GLUD1P00367 558 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 LAG3P18627 525 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 PSMD5Q16401 504 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 SH2D4BQ5SQS7 431 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 SLFN11Q7Z7L1 901 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 EDEM1Q92611 657 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 ERLEC1Q96DZ1 483 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 LRGUKQ96M69 825 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 RAB6BQ9NRW1 208 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 BLOC1S4Q9NUP1 217 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 ZNF212Q9UDV6 495 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 MMEP08473 750 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 PNMA6AP0CW24 399 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 CDH8P55286 799 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 SESN2P58004 480 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 DBN1Q16643 649 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 TC2NQ8N9U0 490 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 FBXO22Q8NEZ5 403 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 CALML6Q8TD86 181 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 AFF4Q9UHB7 1163 aaKnown RBP17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 PLAAQ9Y263 795 aa17.08■□□□□ 0.32
SMARCA4-201ENST00000344626 CST8O60676 142 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 ANXA9O76027 345 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 ZWINTO95229 277 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 OR1D2P34982 312 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 SPARCL1Q14515 664 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 RUBCNQ92622 972 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 ARHGAP39Q9C0H5 1083 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 ARVCFO00192 962 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 LGR5O75473 907 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 TTC4O95801 387 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 APRTP07741 180 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 PAEPP09466 180 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 NDST1P52848 882 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 OXCT1P55809 520 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 PTENP60484 403 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 C2CD6Q53TS8 623 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 HAS1Q92839 578 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 RASA4BC9J798 803 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 B4GALT5O43286 388 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 ATMINO43313 823 aaPredicted RBP17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 RASA4O43374 803 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 CASP2P42575 452 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 GCNT1Q02742 428 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 POU5F1BQ06416 359 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 NAPEPLDQ6IQ20 393 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 ANKS3Q6ZW76 656 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 TBC1D1Q86TI0 1168 aaPredicted RBP17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 LINC00523Q86TU6 105 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 CRLF3Q8IUI8 442 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 KIAA0895Q8NCT3 520 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 CDC26Q8NHZ8 85 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 ELMO3Q96BJ8 720 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 NSMCE4AQ9NXX6 385 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 RRP1BQ14684 758 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 PABPC1LQ4VXU2 614 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 ATAT1Q5SQI0 421 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 WSCD1Q658N2 575 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 CCDC197Q8NCU1 140 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 COL20A1Q9P218 1284 aa17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 CHORDC1Q9UHD1 332 aaPredicted RBP17.07■□□□□ 0.32
SMARCA4-201ENST00000344626 TBC1D3BA6NDS4 549 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 MAPK13O15264 365 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 KDM1AO60341 852 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 SMIM24O75264 130 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 KCNK18Q7Z418 384 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 TFB1MQ8WVM0 346 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 TSPAN17Q96FV3 270 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 TUBB6Q9BUF5 446 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 GPR63Q9BZJ6 419 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 ATRNL1Q5VV63 1379 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 NDUFS3O75489 264 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 DARSP14868 501 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 ITIH2P19823 946 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 MAP4P27816 1152 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 UGCGQ16739 394 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 ZBTB10Q96DT7 871 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 CENPKQ9BS16 269 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 CNPY3Q9BT09 278 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 FOXP3Q9BZS1 431 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 ABCB6Q9NP58 842 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 NUDT5Q9UKK9 219 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 PPP1R11O60927 126 aaPredicted RBP17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 ESRRBO95718 433 aa17.06■□□□□ 0.32
SMARCA4-201ENST00000344626 HIST1H2AGP0C0S8 130 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms