RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 CACNA1IQ9P0X4 2223 aa21.45■■□□□ 1.02
SYNE2-201ENST00000341472 TSC2P49815 1807 aa21.45■■□□□ 1.02
SYNE2-201ENST00000341472 COL4A3Q01955 1670 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 SMC2O95347 1197 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 ASS1P00966 412 aaKnown RBP21.44■■□□□ 1.02
SYNE2-201ENST00000341472 PFKLP17858 780 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 GCLMP48507 274 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 AMPD2Q01433 879 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 ENPEPQ07075 957 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 PPP2R5DQ14738 602 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 TSSK4Q6SA08 328 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 TTC16Q8NEE8 873 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 ENGASEQ8NFI3 743 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 EBF3Q9H4W6 596 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 ZSCAN32Q9NX65 697 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 ATP8B3O60423 1300 aa21.44■■□□□ 1.02
SYNE2-201ENST00000341472 FAM186AA6NE01 2351 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 EP300Q09472 2414 aaPredicted RBP21.43■■□□□ 1.02
SYNE2-201ENST00000341472 C2orf78A6NCI8 922 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 ZNF840PA6NDX5 716 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 CETN3O15182 167 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 KINO60870 393 aaKnown RBP21.43■■□□□ 1.02
SYNE2-201ENST00000341472 ABL1P00519 1130 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 TRIM49P0CI25 452 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 TRIM49CP0CI26 452 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 PIK3CAP42336 1068 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 CXCL12P48061 93 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 CACNA2D1P54289 1103 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 TAF10Q12962 218 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 MTF1Q14872 753 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 PON2Q15165 354 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 EDRF1Q3B7T1 1238 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 ZCWPW2Q504Y3 356 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 TRIM68Q6AZZ1 485 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 ACOT1Q86TX2 421 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 SMYD4Q8IYR2 804 aaPredicted RBP21.43■■□□□ 1.02
SYNE2-201ENST00000341472 NUP93Q8N1F7 819 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 CRYBG2Q8N1P7 616 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 GSDMAQ96QA5 445 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 FAM126AQ9BYI3 521 aaPredicted RBP21.43■■□□□ 1.02
SYNE2-201ENST00000341472 HPS4Q9NQG7 708 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 PRMT8Q9NR22 394 aaPredicted RBP21.43■■□□□ 1.02
SYNE2-201ENST00000341472 RBM12Q9NTZ6 932 aaKnown RBP21.43■■□□□ 1.02
SYNE2-201ENST00000341472 HOOK1Q9UJC3 728 aaKnown RBP21.43■■□□□ 1.02
SYNE2-201ENST00000341472 PCDHGA2Q9Y5H1 932 aa21.43■■□□□ 1.02
SYNE2-201ENST00000341472 ARSAP15289 507 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 CCR3P51677 355 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 NDST1P52848 882 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 PPP3CAQ08209 521 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 SPOPLQ6IQ16 392 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 UNC93AQ86WB7 457 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 SPEM1Q8N4L4 309 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 RIN3Q8TB24 985 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 SH3RF2Q8TEC5 729 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 TIGD1Q96MW7 591 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 SLITRK1Q96PX8 696 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 IMPG2Q9BZV3 1241 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.42■■□□□ 1.02
SYNE2-201ENST00000341472 TMEM30AQ9NV96 361 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 DUS2Q9NX74 493 aaKnown RBP21.42■■□□□ 1.02
SYNE2-201ENST00000341472 ARHGAP26Q9UNA1 814 aa21.42■■□□□ 1.02
SYNE2-201ENST00000341472 OTOL1A6NHN0 477 aaPredicted RBP21.41■■□□□ 1.02
SYNE2-201ENST00000341472 RTN3O95197 1032 aaPredicted RBP21.41■■□□□ 1.02
SYNE2-201ENST00000341472 YWHAQP27348 245 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 GTF2H1P32780 548 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 PRCPP42785 496 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 IFNAR2P48551 515 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 NRLP54845 237 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 GAS6Q14393 721 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 ZNF77Q15935 545 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 ZNF658Q5TYW1 1059 aaPredicted RBP21.41■■□□□ 1.02
SYNE2-201ENST00000341472 PAQR9Q6ZVX9 377 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 SYNPOQ8N3V7 929 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 ZBTB44Q8NCP5 570 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 CCDC150Q8NCX0 1101 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 TAS1R2Q8TE23 839 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 OSCP1Q8WVF1 389 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 NELL1Q92832 810 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 SMARCE1Q969G3 411 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 KCNK16Q96T55 309 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 GTPBP4Q9BZE4 634 aaKnown RBP21.41■■□□□ 1.02
SYNE2-201ENST00000341472 MMRN2Q9H8L6 949 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 CYP3A43Q9HB55 503 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 PCDHA5Q9Y5H7 936 aa21.41■■□□□ 1.02
SYNE2-201ENST00000341472 USP34Q70CQ2 3546 aa21.4■■□□□ 1.02
SYNE2-201ENST00000341472 TCHHQ07283 1943 aa21.4■■□□□ 1.02
SYNE2-201ENST00000341472 TRIM21P19474 475 aaKnown RBP21.4■■□□□ 1.02
SYNE2-201ENST00000341472 ASPAP45381 313 aa21.4■■□□□ 1.02
SYNE2-201ENST00000341472 MCCD1P59942 119 aaPredicted RBP21.4■■□□□ 1.02
SYNE2-201ENST00000341472 GRSF1Q12849 480 aaKnown RBP eCLIP21.4■■□□□ 1.02
SYNE2-201ENST00000341472 FAM35AQ86V20 835 aa21.4■■□□□ 1.02
SYNE2-201ENST00000341472 FUKQ8N0W3 1084 aa21.4■■□□□ 1.02
SYNE2-201ENST00000341472 CPA6Q8N4T0 437 aa21.4■■□□□ 1.02
SYNE2-201ENST00000341472 EEF2KMTQ96G04 330 aa21.4■■□□□ 1.02
SYNE2-201ENST00000341472 SMARCD1Q96GM5 515 aa21.4■■□□□ 1.02
SYNE2-201ENST00000341472 TSG101Q99816 390 aa21.4■■□□□ 1.02
SYNE2-201ENST00000341472 TMEM8AQ9HCN3 771 aa21.4■■□□□ 1.02
SYNE2-201ENST00000341472 TRDMT1O14717 391 aaKnown RBP21.39■■□□□ 1.01
SYNE2-201ENST00000341472 STX10O60499 249 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 AP1G2O75843 785 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms