RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 FAM228BP0C875 321 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 MAPK7Q13164 816 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 NT5DC1Q5TFE4 455 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 ZNF467Q7Z7K2 595 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-201ENST00000340748 ZNF296Q8WUU4 475 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-201ENST00000340748 PTPRN2Q92932 1015 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 ARL8AQ96BM9 186 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 ING2Q9H160 280 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 ALG13Q9NP73 1137 aaKnown RBP13.37□□□□□ -0.27
DNMT1-201ENST00000340748 ARHGEF38Q9NXL2 777 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 PCDHB8Q9UN66 801 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 CHMP2BQ9UQN3 213 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 FOXN3O00409 490 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-201ENST00000340748 LGALS2P05162 132 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 DDX5P17844 614 aaKnown RBP13.37□□□□□ -0.27
DNMT1-201ENST00000340748 STIP1P31948 543 aaKnown RBP13.37□□□□□ -0.27
DNMT1-201ENST00000340748 ITIH5Q86UX2 942 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 C3orf20Q8ND61 904 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 ACTRT1Q8TDG2 376 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 ATXN7L3BQ96GX2 97 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 YY1AP1Q9H869 796 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 XAB2Q9HCS7 855 aaKnown RBP13.37□□□□□ -0.27
DNMT1-201ENST00000340748 SRRDQ9UH36 339 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 RNF103-CHMP3A0A140T963 221 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 TMEM120BA0PK00 339 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 RBP3P10745 1247 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 ALDH18A1P54886 795 aaKnown RBP13.37□□□□□ -0.27
DNMT1-201ENST00000340748 KYNUQ16719 465 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 PPP2R2DQ66LE6 453 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 RBM23Q86U06 439 aaKnown RBP13.37□□□□□ -0.27
DNMT1-201ENST00000340748 C4orf33Q8N1A6 199 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 SLC26A7Q8TE54 656 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 CASKIN2Q8WXE0 1202 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 COPS5Q92905 334 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 CGRRF1Q99675 332 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 TRIM45Q9H8W5 580 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-201ENST00000340748 FAM49BQ9NUQ9 324 aa13.37□□□□□ -0.27
DNMT1-201ENST00000340748 NALCNQ8IZF0 1738 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 RPTORQ8N122 1335 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 CASTOR2A6NHX0 329 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 KLHL2O95198 593 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 SGPL1O95470 568 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 IL10P22301 178 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 HSD17B3P37058 310 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 GEMIN4P57678 1058 aaKnown RBP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 PLD1Q13393 1074 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 C4orf19Q8IY42 314 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 KCNV2Q8TDN2 545 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 AGAP3Q96P47 875 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 AGO4Q9HCK5 861 aaKnown RBP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 DPP3Q9NY33 737 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 PHF20L1A8MW92 1017 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 FDFT1P37268 417 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 USP10Q14694 798 aaKnown RBP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 LBRQ14739 615 aaKnown RBP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 ZNF720Q7Z2F6 126 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 UBA3Q8TBC4 463 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 OLFM3Q96PB7 478 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 NPHS2Q9NP85 383 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 OLFML3Q9NRN5 406 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 SNX5Q9Y5X3 404 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 ITGB3P05106 788 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 MBL2P11226 248 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 RHBDL3P58872 404 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 KCNA10Q16322 511 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 ARHGAP18Q8N392 663 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 SLC7A14Q8TBB6 771 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 GRID1Q9ULK0 1009 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 GFAPP14136 432 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 NPTX2P47972 431 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 PDAP1Q13442 181 aaKnown RBP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 MAPRE1Q15691 268 aaKnown RBP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 KDM7AQ6ZMT4 941 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 DDX42Q86XP3 938 aaKnown RBP eCLIP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 ELMO2Q96JJ3 720 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 MRPL17Q9NRX2 175 aaKnown RBP13.36□□□□□ -0.27
DNMT1-201ENST00000340748 PCMTD2Q9NV79 361 aa13.36□□□□□ -0.27
DNMT1-201ENST00000340748 MYL2P10916 166 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 KCNA2P16389 499 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 KRT4P19013 534 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 ZBTB41Q5SVQ8 909 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 MPZL3Q6UWV2 235 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 GOLPH3Q9H4A6 298 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 WHRNQ9P202 907 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 ZNF197O14709 1029 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 GRAP2O75791 330 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 FAM107AO95990 144 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 ENO1P06733 434 aaKnown RBP13.35□□□□□ -0.27
DNMT1-201ENST00000340748 CYP11B1P15538 503 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 FPGSQ05932 587 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 ACTN3Q08043 901 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-201ENST00000340748 NBPF20Q3BBV1 942 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 LRRC8EQ6NSJ5 796 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 TRPM8Q7Z2W7 1104 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 ARNTL2Q8WYA1 636 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 RIN2Q8WYP3 895 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-201ENST00000340748 CYFIP2Q96F07 1278 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms