RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 IQCF3P0C7M6 154 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 HOXD8P13378 290 aaPredicted RBP20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 EPHB2P29323 1055 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 PSMD6Q15008 389 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 RASA2Q15283 850 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 PKN2Q16513 984 aaKnown RBP20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 TMEM132AQ24JP5 1023 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 SLC45A4Q5BKX6 768 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 MTHFD1LQ6UB35 978 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 ZNF677Q86XU0 584 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 LMNTD2Q8IXW0 634 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 SMC6Q96SB8 1091 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 APBA2Q99767 749 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 PI4K2AQ9BTU6 479 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 LNPEPQ9UIQ6 1025 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 KRT5P13647 590 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 ACADSP16219 412 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 MRPS35P82673 323 aaKnown RBP20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 GCNT1Q02742 428 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 RNASELQ05823 741 aaKnown RBP20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 MBTD1Q05BQ5 628 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 APLFQ8IW19 511 aaPredicted RBP20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 FAM118BQ9BPY3 351 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 PPCSQ9HAB8 311 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 IFT122Q9HBG6 1241 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 SETD4Q9NVD3 440 aa20.57■□□□□ 0.88
NHLRC1-201ENST00000340650 A0A087WZ62 844 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 TYROBPO43914 113 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 HNRNPCL1O60812 293 aaKnown RBP20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 LMNAP02545 664 aaKnown RBP20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 PTPN4P29074 926 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 RPA3P35244 121 aaPredicted RBP20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 TM4SF4P48230 202 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 SLC1A5Q15758 541 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 MARCH8Q5T0T0 291 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 TRIM68Q6AZZ1 485 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 EXD1Q8NHP7 514 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 ZNF398Q8TD17 642 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 SOCS4Q8WXH5 440 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 FDXACB1Q9BRP7 624 aaPredicted RBP20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 SAR1AQ9NR31 198 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 HTTP42858 3142 aa20.56■□□□□ 0.88
NHLRC1-201ENST00000340650 A6NJR5 290 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 C2CD2LO14523 706 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 CA12O43570 354 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 LDHAP00338 332 aaKnown RBP20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 CALCAP01258 141 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 CYP1A1P04798 512 aaPredicted RBP20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 TAS2R40P59535 323 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 ZNF449Q6P9G9 518 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 GSTA5Q7RTV2 222 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 LINC01465Q8N7H1 131 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 CPA5Q8WXQ8 436 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 FZD8Q9H461 694 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 POC1B-GALNT4F8VUJ3 575 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 ACKR2O00590 384 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 CBX6O95503 412 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 KRT15P19012 456 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 PEX19P40855 299 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 TDRD10Q5VZ19 366 aaKnown RBP20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 MON1BQ7L1V2 547 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 OTOAQ7RTW8 1153 aa20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 DENND2DQ9H6A0 471 aaPredicted RBP20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 SSU72Q9NP77 194 aaKnown RBP20.55■□□□□ 0.88
NHLRC1-201ENST00000340650 DPPA5A6NC42 116 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 FAM189A1O60320 539 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 ZC3H11AO75152 810 aaKnown RBP eCLIP20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 CA4P22748 312 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 PCK1P35558 622 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 PTDSS1P48651 473 aaKnown RBP20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 OSTNP61366 133 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 BEX3Q00994 111 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 LBRQ14739 615 aaKnown RBP20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 TAF1BQ53T94 588 aaPredicted RBP20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 ATF7IP2Q5U623 682 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 DAB2IPQ5VWQ8 1189 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 LLGL2Q6P1M3 1020 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 TTC8Q8TAM2 541 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 YIPF3Q9GZM5 350 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 SLC24A2Q9UI40 661 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 COL1A2P08123 1366 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 LIASO43766 372 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 PHKA2P46019 1235 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 NSFP46459 744 aaKnown RBP20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 CLDN10P78369 228 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 SGSM1Q2NKQ1 1148 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 TSNAXIP1Q2TAA8 658 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 HHATQ5VTY9 493 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 EEF1DP3Q658K8 133 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 DRICH1Q6PGQ1 229 aaPredicted RBP20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 C15orf39Q6ZRI6 1047 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 NLRP9Q7RTR0 991 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 PHLDB2Q86SQ0 1253 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 C4orf33Q8N1A6 199 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 ZNF75CPQ92670 426 aaPredicted RBP20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 DCLRE1BQ9H816 532 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 ZFP69BQ9UJL9 534 aa20.54■□□□□ 0.88
NHLRC1-201ENST00000340650 PCDHB2Q9Y5E7 798 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms