RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 GATMP50440 423 aa12.32□□□□□ -0.44
C2orf88-201ENST00000340623 PIGHQ14442 188 aaPredicted RBP12.32□□□□□ -0.44
C2orf88-201ENST00000340623 KRT71Q3SY84 523 aa12.32□□□□□ -0.44
C2orf88-201ENST00000340623 EFHC2Q5JST6 749 aa12.32□□□□□ -0.44
C2orf88-201ENST00000340623 LLGL2Q6P1M3 1020 aa12.32□□□□□ -0.44
C2orf88-201ENST00000340623 KCNT1Q5JUK3 1230 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 MIB1Q86YT6 1006 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 EDEM1Q92611 657 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 TBC1D13Q9NVG8 400 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 DDIT4Q9NX09 232 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 RBAK-RBAKDNI3L0D1 243 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 CTNNA1P35221 906 aaKnown RBP12.31□□□□□ -0.44
C2orf88-201ENST00000340623 CTNNB1P35222 781 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 C1QBPQ07021 282 aaKnown RBP12.31□□□□□ -0.44
C2orf88-201ENST00000340623 ITKQ08881 620 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 PPIGQ13427 754 aaKnown RBP eCLIP12.31□□□□□ -0.44
C2orf88-201ENST00000340623 DARS2Q6PI48 645 aaKnown RBP12.31□□□□□ -0.44
C2orf88-201ENST00000340623 PACS2Q86VP3 889 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 RXFP2Q8WXD0 754 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 FBXO32Q969P5 355 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 PCDHB18PQ96TA0 734 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 RAB17Q9H0T7 212 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 KCNK9Q9NPC2 374 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 RNF14Q9UBS8 474 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 SIX4Q9UIU6 781 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 COL11A1P12107 1806 aaPredicted RBP12.31□□□□□ -0.44
C2orf88-201ENST00000340623 M0QYT0 321 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 CILPO75339 1184 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 SLC1A1P43005 524 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 PDCLQ13371 301 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 PPP2R5EQ16537 467 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 C1orf220Q5T0J3 134 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 SDHAF4Q5VUM1 108 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 AGMOQ6ZNB7 445 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 TMEM139Q8IV31 216 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 SPATA4Q8NEY3 305 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 SMARCD1Q96GM5 515 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 PTPRHQ9HD43 1115 aa12.31□□□□□ -0.44
C2orf88-201ENST00000340623 RRP15Q9Y3B9 282 aaKnown RBP12.31□□□□□ -0.44
C2orf88-201ENST00000340623 SRGAP2BP0DMP2 458 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 HOXD8P13378 290 aaPredicted RBP12.3□□□□□ -0.44
C2orf88-201ENST00000340623 LMO2P25791 158 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 PLTPP55058 493 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 SKIV2LQ15477 1246 aaKnown RBP12.3□□□□□ -0.44
C2orf88-201ENST00000340623 C10orf120Q5SQS8 335 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 PIGZQ86VD9 579 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 TOP6BLQ8N6T0 577 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 SMG8Q8ND04 991 aaKnown RBP12.3□□□□□ -0.44
C2orf88-201ENST00000340623 LRRC45Q96CN5 670 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 DPEP3Q9H4B8 488 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 DMAP1Q9NPF5 467 aaPredicted RBP12.3□□□□□ -0.44
C2orf88-201ENST00000340623 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.3□□□□□ -0.44
C2orf88-201ENST00000340623 HMGXB4Q9UGU5 601 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 TYW5A2RUC4 315 aaKnown RBP12.3□□□□□ -0.44
C2orf88-201ENST00000340623 F8VP50 259 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 TJP3O95049 919 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 APOEP02649 317 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 TIGD5Q53EQ6 642 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 FAM131BQ86XD5 332 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 GIPC2Q8TF65 315 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 C1orf54Q8WWF1 131 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 B3GALT6Q96L58 329 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 FAM118BQ9BPY3 351 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 LPIN3Q9BQK8 851 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 NUDT5Q9UKK9 219 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 SLC27A5Q9Y2P5 690 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 ATP8A1Q9Y2Q0 1164 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 GRID2IPA4D2P6 1211 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 EBAG9O00559 213 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 LRG1P02750 347 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 RAD23BP54727 409 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 JAM2P57087 298 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 NOMO3P69849 1222 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 TFDP2Q14188 446 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 PPP2R5DQ14738 602 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 GRK7Q8WTQ7 553 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 TFAP2BQ92481 460 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 ULBP1Q9BZM6 244 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 CNTN3Q9P232 1028 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 CDH9Q9ULB4 789 aa12.3□□□□□ -0.44
C2orf88-201ENST00000340623 CYP3A5P20815 502 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 GNGT1P63211 74 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 HIC1Q14526 733 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 MICALL1Q8N3F8 863 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 OTUD6BQ8N6M0 293 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 ADAM32Q8TC27 787 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 MGARPQ8TDB4 240 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 ADAM28Q9UKQ2 775 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 REXO2Q9Y3B8 237 aaKnown RBP12.29□□□□□ -0.44
C2orf88-201ENST00000340623 ENPP3O14638 875 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 ZNF263O14978 683 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 NPR3P17342 541 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 KLRC2P26717 231 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 GGCXP38435 758 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 SLCO1A2P46721 670 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 RPL10AP62906 217 aaKnown RBP12.29□□□□□ -0.44
C2orf88-201ENST00000340623 LHX8Q68G74 356 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 C1orf228Q6PIY5 440 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 CPLX4Q7Z7G2 160 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms