RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 TREML1Q86YW5 311 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 CCNJLQ8IV13 435 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 PALM2Q8IXS6 379 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 ENDOVQ8N8Q3 282 aaKnown RBP12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 BANPQ8N9N5 519 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 TMEM174Q8WUU8 243 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 EZH1Q92800 747 aaPredicted RBP12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 CYTH4Q9UIA0 394 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 PCDHA10Q9Y5I2 948 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 MEI4A8MW99 385 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 KBTBD13C9JR72 458 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 H3BRJ5 948 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 EXTL3O43909 919 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 LUC7L3O95232 432 aaKnown RBP12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 ENO1P06733 434 aaKnown RBP12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 FESP07332 822 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 ELK3P41970 407 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 MYL6P60660 151 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 KDSRQ06136 332 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 LAMB3Q13751 1172 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 NCOA4Q13772 614 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 HSF5Q4G112 596 aaPredicted RBP12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 RGS9BPQ6ZS82 235 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 PHF13Q86YI8 300 aaPredicted RBP12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 RCOR2Q8IZ40 523 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 SAMD3Q8N6K7 520 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 HSPH1Q92598 858 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 MCUR1Q96AQ8 359 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 TRIM11Q96F44 468 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 ACAP3Q96P50 834 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 CYTH2Q99418 400 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 ARHGEF4Q9NR80 690 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 IP6K2Q9UHH9 426 aa12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 XPO7Q9UIA9 1087 aaKnown RBP12.52□□□□□ -0.41
CCDC144CP-201ENST00000340196 A0A1B0GVG6 124 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 ZCCHC18P0CG32 403 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 TROVE2P10155 538 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 ZCCHC23Q6ZST2 131 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 DPH6Q7L8W6 267 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 VPS52Q8N1B4 723 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 TEKT4Q8WW24 435 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 ATG4CQ96DT6 458 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 CFAP36Q96G28 342 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 RBM41Q96IZ5 413 aaKnown RBP12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 TTC25Q96NG3 672 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 BTBD10Q9BSF8 475 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 MSTO1Q9BUK6 570 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 ARHGAP28Q9P2N2 729 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 C2CD2Q9Y426 696 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 C3orf70A6NLC5 250 aaPredicted RBP12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 ATP5HO75947 161 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 SORBS2O94875 1100 aaKnown RBP12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 EGFRP00533 1210 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 GMPRP36959 345 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 RANBP1P43487 201 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 PAPOLAP51003 745 aaKnown RBP12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 YWHAGP61981 247 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 KLC1Q07866 573 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 PTK7Q13308 1070 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 PSMD6Q15008 389 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 CWF19L1Q69YN2 538 aaKnown RBP12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 NAT8LQ8N9F0 302 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 SLC35B2Q8TB61 432 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 FAM136AQ96C01 138 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 FAM161BQ96MY7 647 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 EPAS1Q99814 870 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 CALN1Q9BXU9 219 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 TRIM55Q9BYV6 548 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 SHCBP1LQ9BZQ2 653 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 SLC13A1Q9BZW2 595 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 DCLRE1BQ9H816 532 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 CYP26B1Q9NR63 512 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 SCINQ9Y6U3 715 aa12.51□□□□□ -0.41
CCDC144CP-201ENST00000340196 TCRBV9S1A1TA0A576 114 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 CXorf49A8MYA2 514 aaPredicted RBP12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 FCHO1O14526 889 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 AHCYL1O43865 530 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 DLDP09622 509 aaKnown RBP12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 PSMA2P25787 234 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 GMPSP49915 693 aaPredicted RBP12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 RASSF2P50749 326 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 LRRC36Q1X8D7 754 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 DENND1BQ6P3S1 775 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 ADGRD1Q6QNK2 874 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 ENOSF1Q7L5Y1 443 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 ZNF677Q86XU0 584 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 CTAGE3PQ8IX95 158 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 LMNTD2Q8IXW0 634 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 PDCD7Q8N8D1 485 aaKnown RBP12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 NTPCRQ9BSD7 190 aaKnown RBP12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 C20orf27Q9GZN8 174 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 ACSS3Q9H6R3 686 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 PCDH9Q9HC56 1237 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 SPON1Q9HCB6 807 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 ANKEF1Q9NU02 776 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 SHOC2Q9UQ13 582 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 NR2E3Q9Y5X4 410 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 SBF1O95248 1867 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 LRCH4O75427 683 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms