RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 FAM78AQ5JUQ0 283 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 GPR158Q5T848 1215 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 GJB7Q6PEY0 223 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 TMEM270Q6UE05 265 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 MTSS1LQ765P7 747 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 ZMIZ2Q8NF64 920 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 GCNAQ96QF7 691 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 SMOQ99835 787 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 BPIFA3Q9BQP9 254 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 RPP25Q9BUL9 199 aaKnown RBP16.17■□□□□ 0.18
UBE3B-201ENST00000340074 VPS16Q9H269 839 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 HSD3B7Q9H2F3 369 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 CSNK1G1Q9HCP0 422 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 PCDHB4Q9Y5E5 795 aa16.17■□□□□ 0.18
UBE3B-201ENST00000340074 RNF225M0QZC1 329 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-201ENST00000340074 TADA3O75528 432 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 IFRD2Q12894 506 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-201ENST00000340074 TDGQ13569 410 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 ZSCAN23Q3MJ62 389 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 ARHGAP15Q53QZ3 475 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 CLEC20AQ6ZU45 233 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 DHX40Q8IX18 779 aaKnown RBP16.16■□□□□ 0.18
UBE3B-201ENST00000340074 NUP93Q8N1F7 819 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 SLC44A3Q8N4M1 653 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 ZSCAN18Q8TBC5 510 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-201ENST00000340074 NXPE3Q969Y0 559 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 ASB16Q96NS5 453 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 KXD1Q9BQD3 176 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 GPR88Q9GZN0 384 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 APEX2Q9UBZ4 518 aa16.16■□□□□ 0.18
UBE3B-201ENST00000340074 TECTAO75443 2155 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 ZNF18P17022 549 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 FCARP24071 287 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 ZNF165P49910 485 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 ZXDAP98168 799 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 KCNMA1Q12791 1236 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 NFKBIBQ15653 356 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 TANGO2Q6ICL3 276 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 SCAMP5Q8TAC9 235 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 SMARCD2Q92925 531 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 TTLL2Q9BWV7 592 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 DUSP16Q9BY84 665 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 SIX2Q9NPC8 291 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 TICRRQ7Z2Z1 1910 aa16.15■□□□□ 0.18
UBE3B-201ENST00000340074 KIF26AQ9ULI4 1882 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-201ENST00000340074 TNFRSF10BO14763 440 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 NARSO43776 548 aaKnown RBP16.14■□□□□ 0.17
UBE3B-201ENST00000340074 TPM2P07951 284 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 CD19P15391 556 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 NPR3P17342 541 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 CDK11BP21127 795 aaKnown RBP16.14■□□□□ 0.17
UBE3B-201ENST00000340074 SLC5A3P53794 718 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 ARHGAP44Q17R89 818 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 SGO2Q562F6 1265 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 ARHGAP17Q68EM7 881 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 TXNDC8Q6A555 127 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 GPIHBP1Q8IV16 184 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 MAB21L3Q8N8X9 362 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 RBBP8NLQ8NC74 664 aaPredicted RBP16.14■□□□□ 0.17
UBE3B-201ENST00000340074 MRPS31Q92665 395 aaKnown RBP16.14■□□□□ 0.17
UBE3B-201ENST00000340074 EDAQ92838 391 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 JAKMIP2Q96AA8 810 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 ELSPBP1Q96BH3 223 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 SLC46A2Q9BY10 475 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 PLA2G2FQ9BZM2 168 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 TASP1Q9H6P5 420 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 ZFP14Q9HCL3 533 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 EHD2Q9NZN4 543 aa16.14■□□□□ 0.17
UBE3B-201ENST00000340074 LIMA1Q9UHB6 759 aaKnown RBP16.14■□□□□ 0.17
UBE3B-201ENST00000340074 SMTNL1A8MU46 457 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 RTN3O95197 1032 aaPredicted RBP16.13■□□□□ 0.17
UBE3B-201ENST00000340074 CALCAP01258 141 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 PAEPP09466 180 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 VDRP11473 427 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 KRT5P13647 590 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 VIPR2P41587 438 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 ZNF132P52740 706 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 COPB1P53618 953 aaKnown RBP16.13■□□□□ 0.17
UBE3B-201ENST00000340074 MFAP3P55082 362 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 TAF10Q12962 218 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 DPY19L2P1Q6NXN4 242 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 ENOSF1Q7L5Y1 443 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 ARID3BQ8IVW6 561 aaPredicted RBP16.13■□□□□ 0.17
UBE3B-201ENST00000340074 UBALD2Q8IYN6 164 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 ANKRD20A12PQ8NF67 263 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 FAM81BQ96LP2 452 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 AJAP1Q9UKB5 411 aaPredicted RBP16.13■□□□□ 0.17
UBE3B-201ENST00000340074 TSPAN16Q9UKR8 245 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 KIAA1257Q9ULG3 409 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 DUSP12Q9UNI6 340 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 CNTN6Q9UQ52 1028 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 NCANO14594 1321 aa16.13■□□□□ 0.17
UBE3B-201ENST00000340074 HHLA1C9JL84 531 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 ECI2O75521 394 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 ATP1A3P13637 1013 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 DDX6P26196 483 aaKnown RBP eCLIP16.12■□□□□ 0.17
UBE3B-201ENST00000340074 YWHAQP27348 245 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 IQCB1Q15051 598 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 GOLGA7BQ2TAP0 167 aa16.12■□□□□ 0.17
UBE3B-201ENST00000340074 GPRIN1Q7Z2K8 1008 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms