RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 XPNPEP1Q9NQW7 623 aa11.56□□□□□ -0.56
SEMA4D-201ENST00000339861 SPATA31A6Q5VVP1 1343 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 MAFGO15525 162 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 AQP5P55064 265 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 WDR4P57081 412 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 LAMTOR4Q0VGL1 99 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 ASPHQ12797 758 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 STX3Q13277 289 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 NBPF20Q3BBV1 942 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 OTOAQ7RTW8 1153 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 PIGWQ7Z7B1 504 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 TRIM42Q8IWZ5 723 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 COPS5Q92905 334 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 DCPSQ96C86 337 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 APOL2Q9BQE5 337 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 FNDC3AQ9Y2H6 1198 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 SRRM3A6NNA2 597 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 DGKIO75912 1065 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 SNRPAP09012 282 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 GPD1P21695 349 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 ABCD1P33897 745 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 PHKA2P46019 1235 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 SLC12A2P55011 1212 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 TAP1Q03518 808 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 KLC1Q07866 573 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 GOLGA7BQ2TAP0 167 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 SPDYCQ5MJ68 293 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 C1orf220Q5T0J3 134 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 GJC2Q5T442 439 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 C16orf46Q6P387 395 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 DLK2Q6UY11 383 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 DENND5BQ6ZUT9 1274 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 SCUBE3Q8IX30 993 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 CCNYL1Q8N7R7 359 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 KLK14Q9P0G3 267 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 PAEPP09466 180 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 PTGER2P43116 358 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 BAG6P46379 1132 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 NOVP48745 357 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 SLC39A4Q6P5W5 647 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 VCX3BQ9H321 246 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 YY1AP1Q9H869 796 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 RSAD1Q9HA92 442 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 ZFATQ9P243 1243 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 PACSIN3Q9UKS6 424 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 MYH7BA7E2Y1 1941 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 FDX1P10109 184 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 MMP14P50281 582 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 RPL10AP62906 217 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 CUL3Q13618 768 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 KPNB1Q14974 876 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 RASA2Q15283 850 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 FAM47CQ5HY64 1035 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 RFWD2Q8NHY2 731 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 MTBPQ96DY7 904 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 FAM167AQ96KS9 214 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 FOXP3Q9BZS1 431 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 NDE1Q9NXR1 346 aa11.55□□□□□ -0.56
SEMA4D-201ENST00000339861 COL14A1Q05707 1796 aaKnown RBP11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 C5orf60A6NFR6 353 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 GDF10P55107 478 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 PTPN11Q06124 597 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 CAPSQ13938 189 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 SEPT6Q14141 434 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 TMEM132DQ14C87 1099 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 TMEM132BQ14DG7 1078 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 LACTB2Q53H82 288 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 RWDD4Q6NW29 188 aaKnown RBP11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 FAM131BQ86XD5 332 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 RNF135Q8IUD6 432 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 ALLCQ8N6M5 410 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 USP33Q8TEY7 942 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 FAM172AQ8WUF8 416 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 CCDC88AQ3V6T2 1871 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 A0A087WZ62 844 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 SLC4A1P02730 911 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 KCNA3P22001 575 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 RBL1P28749 1068 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 EEF1DP3Q658K8 133 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 MFSD5Q6N075 450 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 MON1BQ7L1V2 547 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 SIX6OS1Q8N1H7 587 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 SAMD3Q8N6K7 520 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 AGBL3Q8NEM8 1001 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 CRYGNQ8WXF5 182 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 FDXACB1Q9BRP7 624 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 MRIQ9BWK5 157 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 ANGPTL2Q9UKU9 493 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 SHOC2Q9UQ13 582 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 MYPNQ86TC9 1320 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 FCHO1O14526 889 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 TCN1P20061 433 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 KCNA4P22459 653 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 MXD4Q14582 209 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 NFIL3Q16649 462 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 FNBP1LQ5T0N5 605 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 AP1ARQ63HQ0 302 aa11.54□□□□□ -0.56
SEMA4D-201ENST00000339861 FAM83AQ86UY5 434 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms