RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 LMAN1P49257 510 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 NDUFV1P49821 464 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 GABPB1Q06547 395 aaPredicted RBP7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 MGAT3Q09327 533 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 NNTQ13423 1086 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 MTM1Q13496 603 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 CCDC14Q49A88 953 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 OLFML1Q6UWY5 402 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 MREGQ8N565 214 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 CCDC33Q8N5R6 958 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 C12orf50Q8NA57 414 aaPredicted RBP7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 APPL2Q8NEU8 664 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 TXLNGYQ9BZA5 131 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 TSPYL2Q9H2G4 693 aaPredicted RBP7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 FAM114A2Q9NRY5 505 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 ASIC3Q9UHC3 531 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 USP18Q9UMW8 372 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 NEU2Q9Y3R4 380 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 TRPV2Q9Y5S1 764 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 hCG_1818297A0A087WSY0 165 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 M0QZ92 97 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 CYB561D2O14569 222 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 ITGB1P05556 798 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 HSPA6P17066 643 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 TAF6P49848 677 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 ATP1A2P50993 1020 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 PITX1P78337 314 aaPredicted RBP7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 ZNF844Q08AG5 666 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 ITGA7Q13683 1181 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 PCBP1Q15365 356 aaKnown RBP eCLIP7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 CA9Q16790 459 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 ZC3H12AQ5D1E8 599 aaKnown RBP7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 HP1BP3Q5SSJ5 553 aaPredicted RBP7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 ALS2CLQ60I27 953 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 SCYL2Q6P3W7 929 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 NPNTQ6UXI9 565 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 PAQR9Q6ZVX9 377 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 RCOR2Q8IZ40 523 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 ADGRF2Q8IZF7 708 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 NIPA2Q8N8Q9 360 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 DDX23Q9BUQ8 820 aaKnown RBP7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 PLVAPQ9BX97 442 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 RHOBTB2Q9BYZ6 727 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 CREBZFQ9NS37 354 aa7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.77□□□□□ -1.16
SRFBP1-201ENST00000339397 GOLGA6CA6NDK9 693 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 FOXO6A8MYZ6 492 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 PODXLO00592 558 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 CST8O60676 142 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 CD4P01730 458 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 GOLGA6DP0CG33 693 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 KDELR1P24390 212 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 FNTAP49354 379 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 CACNA2D1P54289 1103 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 DRG2P55039 364 aaKnown RBP7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 GDF10P55107 478 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 PLCB3Q01970 1234 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 SLC29A2Q14542 456 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 LPIN1Q14693 890 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 TFDP3Q5H9I0 405 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 FUKQ8N0W3 1084 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 NETO2Q8NC67 525 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 ATL2Q8NHH9 583 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 FAXDC2Q96IV6 333 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 KCNK16Q96T55 309 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 ADAM2Q99965 735 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 CALN1Q9BXU9 219 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 SLC4A5Q9BY07 1137 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 ACBD3Q9H3P7 528 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 NGRNQ9NPE2 291 aaKnown RBP7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 TMPRSS4Q9NRS4 437 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 GDAP2Q9NXN4 497 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 GOLGA6AQ9NYA3 693 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 SRRDQ9UH36 339 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 INPP5FQ9Y2H2 1132 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 MYBPHLA2RUH7 354 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 SMIM23A6NLE4 172 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 LIASO43766 372 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 B4GALT3O60512 393 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 PPFIA2O75334 1257 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 TRUB2O95900 331 aaKnown RBP7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 PECAM1P16284 738 aaPredicted RBP7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 ADCY8P40145 1251 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 ZNF143P52747 638 aaPredicted RBP7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 ACLYP53396 1101 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 ITGA8P53708 1063 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 TTC3P53804 2025 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 GAD2Q05329 585 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 MBTPS1Q14703 1052 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 PPP2R5EQ16537 467 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 CCNG2Q16589 344 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 SYCP2LQ5T4T6 812 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 APBB1IPQ7Z5R6 666 aaPredicted RBP7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 TMEM110Q86TL2 294 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 RTN4RL1Q86UN2 441 aaPredicted RBP7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 CRYBG2Q8N1P7 616 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 KCTD6Q8NC69 237 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 B3GALNT2Q8NCR0 500 aa7.77□□□□□ -1.17
SRFBP1-201ENST00000339397 ART4Q93070 314 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms