RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 VNN1O95497 513 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 ASS1P00966 412 aaKnown RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 OATP04181 439 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 ITGAVP06756 1048 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 WEE2P0C1S8 567 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 TMEM191BP0C7N4 346 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 TGFB3P10600 412 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 SELPP16109 830 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 GNA15P30679 374 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 RDXP35241 583 aaKnown RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 KCNJ1P48048 391 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 EFNA5P52803 228 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 NOP14P78316 857 aaKnown RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 SP2Q02086 613 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 BNIP1Q12981 228 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 PIGHQ14442 188 aaPredicted RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 ZNF268Q14587 947 aaPredicted RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 TARBP2Q15633 366 aaKnown RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 TAZQ16635 292 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 HSDL1Q3SXM5 330 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 PCGF5Q86SE9 256 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 CCDC60Q8IWA6 550 aaPredicted RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 C7orf31Q8N865 590 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 CCDC63Q8NA47 563 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 RBBP8NLQ8NC74 664 aaPredicted RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 PHOSPHO2Q8TCD6 241 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 ZNF398Q8TD17 642 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 C1orf54Q8WWF1 131 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 BICD1Q96G01 975 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 BTBD6Q96KE9 485 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 FAM167AQ96KS9 214 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 SPATA33Q96N06 139 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 ANKRD27Q96NW4 1050 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 SLC9A7Q96T83 725 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 FAM213AQ9BRX8 229 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 IMPG2Q9BZV3 1241 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 PCDH9Q9HC56 1237 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 GEMIN8Q9NWZ8 242 aaKnown RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 STRIP2Q9ULQ0 834 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 RPL26L1Q9UNX3 145 aaKnown RBP11.34□□□□□ -0.59
RTN3-201ENST00000338850 MYO9BQ13459 2157 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 CHD7Q9P2D1 2997 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 GBF1Q92538 1859 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 TMEM150BA6NC51 233 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 LIASO43766 372 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 FAM155BO75949 473 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 BAIAP3O94812 1187 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 CA3P07451 260 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 RALAP11233 206 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 CKBP12277 381 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 CCNB1P14635 433 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 IGFBP4P22692 258 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 EIF4BP23588 611 aaKnown RBP11.33□□□□□ -0.6
RTN3-201ENST00000338850 CHKAP35790 457 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 ADCY8P40145 1251 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 NFX1Q12986 1120 aaKnown RBP11.33□□□□□ -0.6
RTN3-201ENST00000338850 PTK7Q13308 1070 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 NEDD9Q14511 834 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 HIC1Q14526 733 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 OASLQ15646 514 aaKnown RBP11.33□□□□□ -0.6
RTN3-201ENST00000338850 SPRED3Q2MJR0 410 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 TRIM71Q2Q1W2 868 aaKnown RBP11.33□□□□□ -0.6
RTN3-201ENST00000338850 PPP1R15BQ5SWA1 713 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 IZUMO3Q5VZ72 239 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 CDCA2Q69YH5 1023 aaPredicted RBP11.33□□□□□ -0.6
RTN3-201ENST00000338850 TRAF7Q6Q0C0 670 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 LRRC8DQ7L1W4 858 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 SPATA21Q7Z572 469 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 HERC6Q8IVU3 1022 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 ALLCQ8N6M5 410 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 TTC13Q8NBP0 860 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 MAML1Q92585 1016 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 WNT8BQ93098 351 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 SLITRK1Q96PX8 696 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 POP1Q99575 1024 aaKnown RBP11.33□□□□□ -0.6
RTN3-201ENST00000338850 DDX23Q9BUQ8 820 aaKnown RBP11.33□□□□□ -0.6
RTN3-201ENST00000338850 KIFC3Q9BVG8 833 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 RXFP1Q9HBX9 757 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 ACP6Q9NPH0 428 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 NKIRAS1Q9NYS0 192 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 RBAKQ9NYW8 714 aaPredicted RBP11.33□□□□□ -0.6
RTN3-201ENST00000338850 STARD13Q9Y3M8 1113 aa11.33□□□□□ -0.6
RTN3-201ENST00000338850 RALGAPA2Q2PPJ7 1873 aa11.32□□□□□ -0.6
RTN3-201ENST00000338850 TET1Q8NFU7 2136 aa11.32□□□□□ -0.6
RTN3-201ENST00000338850 FAM47DPA6NHR8 397 aa11.32□□□□□ -0.6
RTN3-201ENST00000338850 ALOX15BO15296 676 aa11.32□□□□□ -0.6
RTN3-201ENST00000338850 HNRNPCL1O60812 293 aaKnown RBP11.32□□□□□ -0.6
RTN3-201ENST00000338850 NBNO60934 754 aa11.32□□□□□ -0.6
RTN3-201ENST00000338850 ARHGEF15O94989 841 aa11.32□□□□□ -0.6
RTN3-201ENST00000338850 PARNO95453 639 aaKnown RBP11.32□□□□□ -0.6
RTN3-201ENST00000338850 CXCL10P02778 98 aa11.32□□□□□ -0.6
RTN3-201ENST00000338850 VIMP08670 466 aaKnown RBP11.32□□□□□ -0.6
RTN3-201ENST00000338850 BRAFP15056 766 aa11.32□□□□□ -0.6
RTN3-201ENST00000338850 TNNI1P19237 187 aa11.32□□□□□ -0.6
RTN3-201ENST00000338850 GLRA2P23416 452 aa11.32□□□□□ -0.6
RTN3-201ENST00000338850 POLGP54098 1239 aaPredicted RBP11.32□□□□□ -0.6
RTN3-201ENST00000338850 VCPP55072 806 aaKnown RBP11.32□□□□□ -0.6
RTN3-201ENST00000338850 NLRP11P59045 1033 aaKnown RBP11.32□□□□□ -0.6
RTN3-201ENST00000338850 TAS2R40P59535 323 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms