RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SIX4Q9UIU6 781 aa12.3□□□□□ -0.44
CSMD2-202ENST00000338325 ZZEF1O43149 2961 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 ASCC3Q8N3C0 2202 aaKnown RBP12.29□□□□□ -0.44
CSMD2-202ENST00000338325 ADAMTS9Q9P2N4 1935 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 SPEGQ15772 3267 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 GOLGA8IPA6NC78 632 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 ANTXRLA6NF34 631 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 GOLGA8JA6NMD2 632 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 ATP2C2O75185 946 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 GCNT3O95395 438 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 TOP3BO95985 862 aaKnown RBP12.29□□□□□ -0.44
CSMD2-202ENST00000338325 PI4KAP42356 2102 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 PSMC1P62191 440 aaKnown RBP12.29□□□□□ -0.44
CSMD2-202ENST00000338325 ZXDBP98169 803 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 LMAN2Q12907 356 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 MYO1EQ12965 1108 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 RABEP1Q15276 862 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 SF3A1Q15459 793 aaKnown RBP12.29□□□□□ -0.44
CSMD2-202ENST00000338325 UAP1L1Q3KQV9 507 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 TMEM92Q6UXU6 159 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 DPH6Q7L8W6 267 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 FILIP1Q7Z7B0 1213 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 KIAA1958Q8N8K9 716 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 DEFB124Q8NES8 71 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 NOC3LQ8WTT2 800 aaKnown RBP12.29□□□□□ -0.44
CSMD2-202ENST00000338325 GATA6Q92908 595 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 SCNM1Q9BWG6 230 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 NUSAP1Q9BXS6 441 aaKnown RBP12.29□□□□□ -0.44
CSMD2-202ENST00000338325 PDE11AQ9HCR9 933 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 TRPM5Q9NZQ8 1165 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 TBC1D7Q9P0N9 293 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 CDH9Q9ULB4 789 aa12.29□□□□□ -0.44
CSMD2-202ENST00000338325 CACNA1GO43497 2377 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 IGF2RP11717 2491 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 ASPMQ8IZT6 3477 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 MYMKA6NI61 221 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 HNRNPLP14866 589 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSMD2-202ENST00000338325 BDNFP23560 247 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 ANXA13P27216 316 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 GRIK1P39086 918 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 EIF2DP41214 584 aaKnown RBP12.28□□□□□ -0.44
CSMD2-202ENST00000338325 P2RY2P41231 377 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 USP46P62068 366 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 SLC7A9P82251 487 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 ALCAMQ13740 583 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 MAPRE1Q15691 268 aaKnown RBP12.28□□□□□ -0.44
CSMD2-202ENST00000338325 HSF5Q4G112 596 aaPredicted RBP12.28□□□□□ -0.44
CSMD2-202ENST00000338325 TRIM61Q5EBN2 209 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 LMBRD2Q68DH5 695 aaPredicted RBP12.28□□□□□ -0.44
CSMD2-202ENST00000338325 DENND5BQ6ZUT9 1274 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 LPCAT2Q7L5N7 544 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 LIMS2Q7Z4I7 341 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 BRAPQ7Z569 592 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 SYCP3Q8IZU3 236 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 ALLCQ8N6M5 410 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 TXNDC5Q8NBS9 432 aaKnown RBP12.28□□□□□ -0.44
CSMD2-202ENST00000338325 WHAMMQ8TF30 809 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 KBTBD7Q8WVZ9 684 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 DNAJC19Q96DA6 116 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 ANKRD36BP1Q96IX9 119 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 EPSTI1Q96J88 318 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 PNKPQ96T60 521 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 CBWD1Q9BRT8 395 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 TTLL2Q9BWV7 592 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 POLMQ9NP87 494 aaPredicted RBP12.28□□□□□ -0.44
CSMD2-202ENST00000338325 CRTAC1Q9NQ79 661 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 OLFML3Q9NRN5 406 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 EHD2Q9NZN4 543 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 CCDC39Q9UFE4 941 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
CSMD2-202ENST00000338325 R3HCC1Q9Y3T6 440 aaKnown RBP12.28□□□□□ -0.44
CSMD2-202ENST00000338325 PCDHB13Q9Y5F0 798 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 AKAP13Q12802 2813 aa12.28□□□□□ -0.44
CSMD2-202ENST00000338325 SLC9A3R1O14745 358 aaPredicted RBP12.27□□□□□ -0.44
CSMD2-202ENST00000338325 TNFRSF10BO14763 440 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 TRIM66O15016 1216 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 KLF8O95600 359 aaPredicted RBP12.27□□□□□ -0.44
CSMD2-202ENST00000338325 APODP05090 189 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 CHRM1P11229 460 aaPredicted RBP12.27□□□□□ -0.44
CSMD2-202ENST00000338325 LMO2P25791 158 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 TIE1P35590 1138 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 PPP3CCP48454 512 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 CASP5P51878 434 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 CYP27A1Q02318 531 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 RESTQ13127 1097 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 DHCR24Q15392 516 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 EOGTQ5NDL2 527 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 LARP1BQ659C4 914 aaKnown RBP12.27□□□□□ -0.44
CSMD2-202ENST00000338325 USP49Q70CQ1 688 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 SV2BQ7L1I2 683 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 ARMCX6Q7L4S7 300 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 SYT12Q8IV01 421 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 SFTPA1Q8IWL2 248 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 GPD1LQ8N335 351 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 IL17RCQ8NAC3 791 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 RLN3Q8WXF3 142 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 HPDLQ96IR7 371 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 FNBP1Q96RU3 617 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 PCIF1Q9H4Z3 704 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 SLC32A1Q9H598 525 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms