RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 AXIN2Q9Y2T1 843 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 UPP2O95045 317 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 ALDH2P05091 517 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 CKBP12277 381 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 ATP1A3P13637 1013 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 DNAJB2P25686 324 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 RPS6P62753 249 aaKnown RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 STARD7Q9NQZ5 370 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 DNPEPQ9ULA0 475 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 TRIM49P0CI25 452 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 TRIM49CP0CI26 452 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 SERPINB8P50452 374 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 LRRC23Q53EV4 343 aaPredicted RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 TEX9Q8N6V9 391 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 KRT84Q9NSB2 600 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 ADGRG1Q9Y653 693 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 STX7O15400 261 aaKnown RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 MEFVO15553 781 aaPredicted RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 ZRANB3Q5FWF4 1079 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 PPP4R4Q6NUP7 873 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 SLFN11Q7Z7L1 901 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 TXNRD3Q86VQ6 643 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 OTULINQ96BN8 352 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 TSC22D3Q99576 134 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 CCDC90BQ9GZT6 254 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.72□□□□□ -0.37
FN1-202ENST00000336916 WHRNQ9P202 907 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 TECPR2O15040 1411 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 NUP98P52948 1817 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 CKMP06732 381 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 PGK2P07205 417 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 CYP2B6P20813 491 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 NFRKBQ6P4R8 1299 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 MPZL3Q6UWV2 235 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 ATG9AQ7Z3C6 839 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 POP5Q969H6 163 aaKnown RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 REPS1Q96D71 796 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 SPASTQ9UBP0 616 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 GZMAP12544 262 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 ALOX15P16050 662 aaPredicted RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 PABPC1LQ4VXU2 614 aaKnown RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 RIN3Q8TB24 985 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 VDRP11473 427 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 UQCRBP14927 111 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 AVPR1AP37288 418 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 DEFA1P59665 94 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 DEFA3P59666 94 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 PPARDQ03181 441 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 LRRC74AQ0VAA2 488 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 ACAD10Q6JQN1 1059 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 CASP10Q92851 521 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 SPATA17Q96L03 361 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 OXCT2Q9BYC2 517 aaPredicted RBP12.71□□□□□ -0.37
FN1-202ENST00000336916 TBC1D13Q9NVG8 400 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 DBR1Q9UK59 544 aaKnown RBP12.71□□□□□ -0.37
FN1-202ENST00000336916 AP1G2O75843 785 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 TGM2P21980 687 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 HIRAP54198 1017 aaPredicted RBP12.71□□□□□ -0.37
FN1-202ENST00000336916 DCLK3Q9C098 648 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 ZSCAN32Q9NX65 697 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 AP3M1Q9Y2T2 418 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 CTSHP09668 335 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 SESN2P58004 480 aaPredicted RBP12.71□□□□□ -0.37
FN1-202ENST00000336916 Q4G0T1 1027 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 ADGRF2Q8IZF7 708 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 AGGF1Q8N302 714 aaeCLIP12.71□□□□□ -0.37
FN1-202ENST00000336916 EXD1Q8NHP7 514 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 SIKE1Q9BRV8 207 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 IMPAD1Q9NX62 359 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 DCTN4Q9UJW0 460 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 HPGDP15428 266 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 CYP11B2P19099 503 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 DEPDC1Q5TB30 811 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 CLEC4FQ8N1N0 589 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 FTHL17Q9BXU8 183 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 SOX13Q9UN79 622 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 NCKAP1Q9Y2A7 1128 aa12.71□□□□□ -0.37
FN1-202ENST00000336916 FAM196BA6NMK8 535 aa12.71□□□□□ -0.38
FN1-202ENST00000336916 SLC15A2Q16348 729 aa12.71□□□□□ -0.38
FN1-202ENST00000336916 WDR49Q8IV35 697 aa12.71□□□□□ -0.38
FN1-202ENST00000336916 APLFQ8IW19 511 aaPredicted RBP12.71□□□□□ -0.38
FN1-202ENST00000336916 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.38
FN1-202ENST00000336916 WWOXQ9NZC7 414 aa12.71□□□□□ -0.38
FN1-202ENST00000336916 RRM2P31350 389 aa12.71□□□□□ -0.38
FN1-202ENST00000336916 GGCXP38435 758 aa12.71□□□□□ -0.38
FN1-202ENST00000336916 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.38
FN1-202ENST00000336916 SPIRE2Q8WWL2 714 aa12.71□□□□□ -0.38
FN1-202ENST00000336916 FAM162AQ96A26 154 aa12.71□□□□□ -0.38
FN1-202ENST00000336916 ABHD16BQ9H3Z7 469 aa12.71□□□□□ -0.38
FN1-202ENST00000336916 DARSP14868 501 aaKnown RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 ACAP1Q15027 740 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 ERGIC2Q96RQ1 377 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 ILKAPQ9H0C8 392 aaPredicted RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 CCDC134Q9H6E4 229 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 CNTNAP5Q8WYK1 1306 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 CD2BP2O95400 341 aaKnown RBP12.7□□□□□ -0.38
FN1-202ENST00000336916 VCPIP1Q96JH7 1222 aa12.7□□□□□ -0.38
FN1-202ENST00000336916 POLE3Q9NRF9 147 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms