RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 HPSEQ9Y251 543 aa18.91■□□□□ 0.62
CMTM1-204ENST00000336328 C4BPAP04003 597 aaKnown RBP18.9■□□□□ 0.62
CMTM1-204ENST00000336328 TDGF1P13385 188 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 DRD1P21728 446 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 NCOA4Q13772 614 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 GAS6Q14393 721 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 ZNF699Q32M78 642 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 FBXO43Q4G163 708 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 TMEM196Q5HYL7 178 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 LONP2Q86WA8 852 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 ARL14EPQ8N8R7 260 aaPredicted RBP18.9■□□□□ 0.62
CMTM1-204ENST00000336328 B3GALNT2Q8NCR0 500 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 KIAA0895Q8NCT3 520 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 STKLD1Q8NE28 680 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 TAF4BQ92750 862 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 ATP2A3Q93084 1043 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 SLITRK1Q96PX8 696 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 XYLT2Q9H1B5 865 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 KCTD10Q9H3F6 313 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 HPS4Q9NQG7 708 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 GCNT4Q9P109 453 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 ARHGAP26Q9UNA1 814 aa18.9■□□□□ 0.62
CMTM1-204ENST00000336328 GPR179Q6PRD1 2367 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 OBSL1O75147 1896 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 FAM237AA0A1B0GTK4 181 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 A0A1W2PQ27 194 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 A0A1W2PQ64 194 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 A0A1W2PQD8 194 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 F8VP50 259 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 MAPK13O15264 365 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 TADA3O75528 432 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 RTN3O95197 1032 aaPredicted RBP18.89■□□□□ 0.61
CMTM1-204ENST00000336328 NR3C1P04150 777 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 DCLK2Q8N568 766 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 DNAI2Q9GZS0 605 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 ECT2Q9H8V3 914 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 TRAF3IP3Q9Y228 551 aa18.89■□□□□ 0.61
CMTM1-204ENST00000336328 KIF26AQ9ULI4 1882 aaPredicted RBP18.88■□□□□ 0.61
CMTM1-204ENST00000336328 GREB1Q4ZG55 1949 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 ANAPC1Q9H1A4 1944 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 ZNF840PA6NDX5 716 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 LRRIQ3A6PVS8 624 aaPredicted RBP18.88■□□□□ 0.61
CMTM1-204ENST00000336328 RHOBTB3O94955 611 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 RPL13P26373 211 aaKnown RBP18.88■□□□□ 0.61
CMTM1-204ENST00000336328 CASP4P49662 377 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 ZNF77Q15935 545 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 CCDC142Q17RM4 750 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 CEP135Q66GS9 1140 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 TRIM68Q6AZZ1 485 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 LAIR1Q6GTX8 287 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 NUP93Q8N1F7 819 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 PDZD8Q8NEN9 1154 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 SH3RF2Q8TEC5 729 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 P2RY13Q9BPV8 354 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 GZF1Q9H116 711 aaPredicted RBP18.88■□□□□ 0.61
CMTM1-204ENST00000336328 COMMD8Q9NX08 183 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 SLC8A2Q9UPR5 921 aa18.88■□□□□ 0.61
CMTM1-204ENST00000336328 WDR87Q6ZQQ6 2873 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 CCDC163A0A0D9SF12 145 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 C2orf78A6NCI8 922 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 PRR5-ARHGAP8B1AHC4 643 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 SLC9A3R1O14745 358 aaPredicted RBP18.87■□□□□ 0.61
CMTM1-204ENST00000336328 ARSAP15289 507 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 YWHAQP27348 245 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 GJA4P35212 333 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 GALK1P51570 392 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 NDUFA8P51970 172 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 ARHGAP8P85298 464 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 USP4Q13107 963 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 SIM2Q14190 667 aaPredicted RBP18.87■□□□□ 0.61
CMTM1-204ENST00000336328 PUM1Q14671 1186 aaKnown RBP eCLIP18.87■□□□□ 0.61
CMTM1-204ENST00000336328 Q6ZS52 159 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 DDX42Q86XP3 938 aaKnown RBP eCLIP18.87■□□□□ 0.61
CMTM1-204ENST00000336328 TTC16Q8NEE8 873 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 OVCA2Q8WZ82 227 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 SLC22A12Q96S37 553 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 B3GNT5Q9BYG0 378 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 ZDHHC9Q9Y397 364 aa18.87■□□□□ 0.61
CMTM1-204ENST00000336328 DMDP11532 3685 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 CHURC1-FNTBB4DL54 471 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 K7ESF4 209 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 LRP3O75074 770 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 NFATC1O95644 943 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 ABL1P00519 1130 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 RETP07949 1114 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 KRT13P13646 458 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 FNTBP49356 437 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 SLC7A9P82251 487 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 ENPEPQ07075 957 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 TAF10Q12962 218 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 NFIL3Q16649 462 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 ZACNQ401N2 412 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 FSTL4Q6MZW2 842 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 KRBA2Q6ZNG9 492 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 PRR23BQ6ZRT6 265 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 INTS8Q75QN2 995 aaKnown RBP18.86■□□□□ 0.61
CMTM1-204ENST00000336328 UNC93AQ86WB7 457 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 CAMKK1Q8N5S9 505 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 PLEKHO2Q8TD55 490 aa18.86■□□□□ 0.61
CMTM1-204ENST00000336328 CD101Q93033 1021 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms