RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 VEPH1Q14D04 833 aa14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 CLUL1Q15846 466 aa14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 PKDCCQ504Y2 493 aa14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 E4F1Q66K89 784 aaPredicted RBP14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 PASD1Q8IV76 773 aa14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 CMASQ8NFW8 434 aaPredicted RBP14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 FEZF2Q8TBJ5 459 aa14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 DDX1Q92499 740 aaKnown RBP14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 SMG7Q92540 1137 aaKnown RBP14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 ZNF707Q96C28 371 aaPredicted RBP14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 SPATA17Q96L03 361 aa14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 ZNF512Q96ME7 567 aaPredicted RBP14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 UBE2ZQ9H832 354 aaPredicted RBP14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 PIDD1Q9HB75 910 aa14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 NOCTQ9UK39 431 aaKnown RBP14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 PCDHGC3Q9UN70 934 aa14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 ASB3Q9Y575 518 aa14.89□□□□□ -0.03
APOBEC3B-202ENST00000335760 SLC38A8A6NNN8 435 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 AKR1B15C9JRZ8 316 aaPredicted RBP14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 H3BQ06 376 aaPredicted RBP14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 TULP2O00295 520 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 XPO1O14980 1071 aaKnown RBP14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 SETSIPP0DME0 302 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 SKILP12757 684 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 KCNA5P22460 613 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 ADKP55263 362 aaKnown RBP14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 CDR2Q01850 454 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 MTMR3Q13615 1198 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 TAF12Q16514 161 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 MEA1Q16626 185 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 DNAJB7Q7Z6W7 309 aaPredicted RBP14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 ITIH5Q86UX2 942 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 ZNF677Q86XU0 584 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 SPC24Q8NBT2 197 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 OR8K1Q8NGG5 319 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 SYN2Q92777 582 aaPredicted RBP14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 HLA-CQ95604 372 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 MSLNLQ96KJ4 702 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 AGPAT1Q99943 283 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 S1PR5Q9H228 398 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 HCFC1R1Q9NWW0 138 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 CD207Q9UJ71 328 aa14.88□□□□□ -0.03
APOBEC3B-202ENST00000335760 HHLA1C9JL84 531 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 PAPLNO95428 1278 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 POU2F2P09086 479 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 PTPN2P17706 415 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 CHRNB2P17787 502 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 PRKCIP41743 596 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 GPD2P43304 727 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 FMO1Q01740 532 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 ITIH3Q06033 890 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 KLHL30Q0D2K2 578 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 TSR1Q2NL82 804 aaKnown RBP14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 CES5AQ6NT32 575 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 DENND5BQ6ZUT9 1274 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 GPR149Q86SP6 731 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 PIGZQ86VD9 579 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 CNGA4Q8IV77 575 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 NUP93Q8N1F7 819 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 SLC35F5Q8WV83 523 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 PSMG2Q969U7 264 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 CEP295NLQ96MC4 621 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 CORO1BQ9BR76 489 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 UBXN6Q9BZV1 441 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 LHX5Q9H2C1 402 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 ADAM7Q9H2U9 754 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 HAUS4Q9H6D7 363 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 ABHD10Q9NUJ1 306 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 MAGED2Q9UNF1 606 aaPredicted RBP14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 CEP83Q9Y592 693 aa14.87□□□□□ -0.03
APOBEC3B-202ENST00000335760 TNFRSF10BO14763 440 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 SERPING1P05155 500 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 CSH1P0DML2 217 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 CSH2P0DML3 217 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 HMGA1P17096 107 aaKnown RBP14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 TNFAIP3P21580 790 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 PLA2G4AP47712 749 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 RGS7P49802 495 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 SLC5A3P53794 718 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 NTHL1P78549 312 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 IFRD2Q12894 506 aaPredicted RBP14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 ARID5BQ14865 1188 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 CYP26C1Q6V0L0 522 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 GPRIN1Q7Z2K8 1008 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 ZNF571Q7Z3V5 609 aaPredicted RBP14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 GRASPQ7Z6J2 395 aaPredicted RBP14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 HS6ST3Q8IZP7 471 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 C1orf131Q8NDD1 294 aaKnown RBP14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 DNAJC7Q99615 494 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 PNPLA8Q9NP80 782 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 SEPT11Q9NVA2 429 aaKnown RBP14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 ZNHIT6Q9NWK9 470 aaKnown RBP14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 DNMT3BQ9UBC3 853 aaKnown RBP14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 CDH22Q9UJ99 828 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 COG5Q9UP83 839 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 PATJQ8NI35 1801 aa14.86□□□□□ -0.03
APOBEC3B-202ENST00000335760 FAM170AA1A519 330 aa14.85□□□□□ -0.03
APOBEC3B-202ENST00000335760 RTN3O95197 1032 aaPredicted RBP14.85□□□□□ -0.03
APOBEC3B-202ENST00000335760 HNRNPH3P31942 346 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms