RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SPATA18Q8TC71 538 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 MCRS1Q96EZ8 462 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 RMDN2Q96LZ7 410 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 ASB7Q9H672 318 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 ECT2Q9H8V3 914 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 ASNSD1Q9NWL6 643 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 SLC24A2Q9UI40 661 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 SMG5Q9UPR3 1016 aaKnown RBP18.55■□□□□ 0.56
LRCH3-201ENST00000334859 ASB14A6NK59 587 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 CHUKO15111 745 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 PRPF4O43172 522 aaKnown RBP eCLIP18.54■□□□□ 0.56
LRCH3-201ENST00000334859 PIAS1O75925 651 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 ASMTLO95671 621 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 TRUB2O95900 331 aaKnown RBP18.54■□□□□ 0.56
LRCH3-201ENST00000334859 RBP3P10745 1247 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 VDRP11473 427 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 RPA3P35244 121 aaPredicted RBP18.54■□□□□ 0.56
LRCH3-201ENST00000334859 GPD2P43304 727 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 NDST1P52848 882 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 GEMIN4P57678 1058 aaKnown RBP18.54■□□□□ 0.56
LRCH3-201ENST00000334859 ELF3P78545 371 aaPredicted RBP18.54■□□□□ 0.56
LRCH3-201ENST00000334859 DNAJC3Q13217 504 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 CDO1Q16878 200 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 SLC10A6Q3KNW5 377 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 BBS9Q3SYG4 887 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 SMYD5Q6GMV2 418 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 NAT8LQ8N9F0 302 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 NLRP7Q8WX94 980 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 FAXDC2Q96IV6 333 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 PPCSQ9HAB8 311 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 TMEM63AO94886 807 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 GABRB2P47870 512 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 CDH6P55285 790 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 MMRN1Q13201 1228 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 FAM187BQ17R55 369 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 SH3PXD2AQ5TCZ1 1133 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 MAP1SQ66K74 1059 aaPredicted RBP18.54■□□□□ 0.56
LRCH3-201ENST00000334859 OR6B2Q6IFH4 312 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 PNMA8AQ86V59 439 aaPredicted RBP18.54■□□□□ 0.56
LRCH3-201ENST00000334859 FBXO36Q8NEA4 188 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 CMASQ8NFW8 434 aaPredicted RBP18.54■□□□□ 0.56
LRCH3-201ENST00000334859 SPOCK2Q92563 424 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 CDCA5Q96FF9 252 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 PEBP4Q96S96 227 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 MAK16Q9BXY0 300 aaKnown RBP18.54■□□□□ 0.56
LRCH3-201ENST00000334859 RSAD1Q9HA92 442 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 XPO7Q9UIA9 1087 aaKnown RBP18.54■□□□□ 0.56
LRCH3-201ENST00000334859 PCNTO95613 3336 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 ZSWIM8A7E2V4 1837 aa18.54■□□□□ 0.56
LRCH3-201ENST00000334859 A0A1W2PPM1 405 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 TCRBV7S3A2A0A539 114 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 E5RJQ4 531 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 GRAP2O75791 330 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 GPD1P21695 349 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 ZNF143P52747 638 aaPredicted RBP18.53■□□□□ 0.56
LRCH3-201ENST00000334859 NRLP54845 237 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 NCALDP61601 193 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 EFHC2Q5JST6 749 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 ILDR2Q71H61 639 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 PDIK1LQ8N165 341 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 THOC1Q96FV9 657 aaKnown RBP18.53■□□□□ 0.56
LRCH3-201ENST00000334859 PRKAG3Q9UGI9 489 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 PNMA3Q9UL41 463 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 BARX2Q9UMQ3 279 aaPredicted RBP18.53■□□□□ 0.56
LRCH3-201ENST00000334859 CFAP73A6NFT4 308 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 PDGFRAP16234 1089 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 ROR1Q01973 937 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 MOGSQ13724 837 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 LAMC2Q13753 1193 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 ACAP1Q15027 740 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 NPNTQ6UXI9 565 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 C3orf62Q6ZUJ4 267 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 FASTKD5Q7L8L6 764 aaKnown RBP18.53■□□□□ 0.56
LRCH3-201ENST00000334859 ZC3H18Q86VM9 953 aaKnown RBP18.53■□□□□ 0.56
LRCH3-201ENST00000334859 FITM2Q8N6M3 262 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 GRAMD1AQ96CP6 724 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 PIWIL1Q96J94 861 aaKnown RBP18.53■□□□□ 0.56
LRCH3-201ENST00000334859 CNPY3Q9BT09 278 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 VRTNQ9H8Y1 702 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 RXFP1Q9HBX9 757 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 DPP3Q9NY33 737 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 RABGEF1Q9UJ41 708 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 TSPAN16Q9UKR8 245 aa18.53■□□□□ 0.56
LRCH3-201ENST00000334859 MAGEB2O15479 319 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 KRT4P19013 534 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 C15orf59Q2T9L4 293 aaPredicted RBP18.52■□□□□ 0.56
LRCH3-201ENST00000334859 RAB6CQ53S08 254 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 HHATQ5VTY9 493 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 DARS2Q6PI48 645 aaKnown RBP18.52■□□□□ 0.56
LRCH3-201ENST00000334859 FAM183BPQ6ZVS7 135 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 PALM2Q8IXS6 379 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 DENND1AQ8TEH3 1009 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 FBF1Q8TES7 1133 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 AFG1LQ8WV93 481 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 PAFAH2Q99487 392 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 WDR83Q9BRX9 315 aaKnown RBP18.52■□□□□ 0.56
LRCH3-201ENST00000334859 RAB6CQ9H0N0 254 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 ITGA11Q9UKX5 1188 aa18.52■□□□□ 0.56
LRCH3-201ENST00000334859 PRPSAP2O60256 369 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 MGRN1O60291 552 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms