RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TRPV1Q8NER1 839 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 RNF25Q96BH1 459 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-201ENST00000334136 FZD8Q9H461 694 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 PIDD1Q9HB75 910 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 SLC4A7Q9Y6M7 1214 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 EDIL3O43854 480 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 PFDN1O60925 122 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 ATICP31939 592 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 CHRNA3P32297 505 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 SCTRP47872 440 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 BCAR1P56945 870 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 SKIV2LQ15477 1246 aaKnown RBP12.36□□□□□ -0.43
HDAC6-201ENST00000334136 DTX3LQ8TDB6 740 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 RUBCNQ92622 972 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 APBB2Q92870 758 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 TLR10Q9BXR5 811 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-201ENST00000334136 GIT1Q9Y2X7 761 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 CFAP69A5D8W1 941 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 AARSP49588 968 aaKnown RBP eCLIP12.36□□□□□ -0.43
HDAC6-201ENST00000334136 SPOPLQ6IQ16 392 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 LRRC55Q6ZSA7 311 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 FAM118BQ9BPY3 351 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 C11orf70Q9BRQ4 267 aa12.36□□□□□ -0.43
HDAC6-201ENST00000334136 USP15Q9Y4E8 981 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-201ENST00000334136 A0A1W2PQJ5 194 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 STILQ15468 1287 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 COBLL1Q53SF7 1204 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 B3GNT9Q6UX72 402 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 LRIG3Q6UXM1 1119 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 DHX38Q92620 1227 aaKnown RBP12.35□□□□□ -0.43
HDAC6-201ENST00000334136 PDZD7Q9H5P4 517 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 PRRG1O14668 218 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 MAP3K7O43318 606 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 CAND2O75155 1236 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 URODP06132 367 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 GRIK1P39086 918 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 PDE1CQ14123 709 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-201ENST00000334136 JAMLQ86YT9 394 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 PYROXD1Q8WU10 500 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 KAT2BQ92831 832 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 TIMM13Q9Y5L4 95 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-201ENST00000334136 TMEM120BA0PK00 339 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 FAM187AA6NFU0 413 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 H7C0C1 242 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 KRT1P04264 644 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 NFICP08651 508 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 ATP5OP48047 213 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 KYNUQ16719 465 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 GEN1Q17RS7 908 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 TRIM72Q6ZMU5 477 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 SERINC5Q86VE9 423 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 C12orf56Q8IXR9 622 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 ZNF564Q8TBZ8 553 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-201ENST00000334136 TTC1Q99614 292 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 NUP85Q9BW27 656 aa12.35□□□□□ -0.43
HDAC6-201ENST00000334136 G3BP2Q9UN86 482 aaKnown RBP12.35□□□□□ -0.43
HDAC6-201ENST00000334136 ACRP10323 421 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 HSPA8P11142 646 aaKnown RBP12.34□□□□□ -0.43
HDAC6-201ENST00000334136 CKBP12277 381 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 SYN1P17600 705 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 MCL1Q07820 350 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 AENQ8WTP8 325 aaKnown RBP12.34□□□□□ -0.43
HDAC6-201ENST00000334136 ERP44Q9BS26 406 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 CALN1Q9BXU9 219 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 EIF2AQ9BY44 585 aaKnown RBP12.34□□□□□ -0.43
HDAC6-201ENST00000334136 MCOLN1Q9GZU1 580 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 MINDY3Q9H8M7 445 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 ZFP69BQ9UJL9 534 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 NAGPAQ9UK23 515 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 L3MBTL1Q9Y468 752 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 GTPBP10A4D1E9 387 aaKnown RBP12.34□□□□□ -0.43
HDAC6-201ENST00000334136 DCTN3O75935 186 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 MYBL1P10243 752 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 DLG4P78352 724 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 PPP3CAQ08209 521 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 CTXN3Q4LDR2 81 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 FAM171A1Q5VUB5 890 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 ADGRF2Q8IZF7 708 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 USP6NLQ92738 828 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 ATP2A3Q93084 1043 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 ERP27Q96DN0 273 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 STOML1Q9UBI4 398 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 PPARGC1AQ9UBK2 798 aaKnown RBP12.34□□□□□ -0.43
HDAC6-201ENST00000334136 MAGED2Q9UNF1 606 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-201ENST00000334136 ARL2BPQ9Y2Y0 163 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 GOLGA8RI6L899 631 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 SAT1P21673 171 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 DNAJB2P25686 324 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 HSPA9P38646 679 aaKnown RBP12.34□□□□□ -0.43
HDAC6-201ENST00000334136 LMNB2Q03252 620 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 TTMPQ5BVD1 217 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 C4orf50Q6ZRC1 276 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 TATDN2Q93075 761 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 AGPAT1Q99943 283 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 DSEQ9UL01 958 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 TTLL3Q9Y4R7 772 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 UMODL1Q5DID0 1318 aa12.34□□□□□ -0.43
HDAC6-201ENST00000334136 H7C4K7 107 aa12.33□□□□□ -0.43
HDAC6-201ENST00000334136 FOXN3O00409 490 aaPredicted RBP12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms