RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.46■□□□□ 0.39
SHOX-201ENST00000334060 NAGPAQ9UK23 515 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 PCDHGC3Q9UN70 934 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 IRAK3Q9Y616 596 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 USP27XA6NNY8 438 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 PTP4A2Q12974 167 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 TAF5Q15542 800 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 ANKRD52Q8NB46 1076 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 ZNF461Q8TAF7 563 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 SPATA18Q8TC71 538 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 ARHGEF26Q96DR7 871 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 SAMD11Q96NU1 681 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 DUSP16Q9BY84 665 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 NUCKS1Q9H1E3 243 aaKnown RBP17.46■□□□□ 0.39
SHOX-201ENST00000334060 IGFLR1Q9H665 355 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 ST7Q9NRC1 585 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 DUSP10Q9Y6W6 482 aa17.46■□□□□ 0.39
SHOX-201ENST00000334060 E5RJQ4 531 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 AKR1B10O60218 316 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 NDUFA10O95299 355 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 NPR3P17342 541 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 ABCB4P21439 1286 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 UBE3AQ05086 875 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 PDCLQ13371 301 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 DCP1BQ8IZD4 617 aaKnown RBP17.45■□□□□ 0.38
SHOX-201ENST00000334060 C12orf76Q8N812 135 aaPredicted RBP17.45■□□□□ 0.38
SHOX-201ENST00000334060 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 TRIM7Q9C029 511 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 DEF6Q9H4E7 631 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 FNIP2Q9P278 1114 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 PCDHB5Q9Y5E4 795 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 HCFC2Q9Y5Z7 792 aa17.45■□□□□ 0.38
SHOX-201ENST00000334060 SSU72P8A0A1W2PR75 194 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 FAM200BP0CF97 657 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 LCP1P13796 627 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 ATF2P15336 505 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 GRIK1P39086 918 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 BPIFB4P59827 614 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 CDK17Q00537 523 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 SLC18A3Q16572 532 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 CFAP221Q4G0U5 840 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 TCEAL5Q5H9L2 206 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 CCDC122Q5T0U0 273 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 SLC7A14Q8TBB6 771 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 APOL5Q9BWW9 433 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 LACRTQ9GZZ8 138 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 MIS12Q9H081 205 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 EPN1Q9Y6I3 576 aaPredicted RBP17.44■□□□□ 0.38
SHOX-201ENST00000334060 VCANP13611 3396 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 A0A1W2PPC1 479 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 ARHGEF37A1IGU5 675 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 GLP2RO95838 553 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 HAPLN1P10915 354 aaPredicted RBP17.44■□□□□ 0.38
SHOX-201ENST00000334060 BST2Q10589 180 aaKnown RBP17.44■□□□□ 0.38
SHOX-201ENST00000334060 TSR1Q2NL82 804 aaKnown RBP17.44■□□□□ 0.38
SHOX-201ENST00000334060 ALKBH5Q6P6C2 394 aaKnown RBP17.44■□□□□ 0.38
SHOX-201ENST00000334060 HFE2Q6ZVN8 426 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 SCUBE3Q8IX30 993 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 TTC39CQ8N584 583 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 MYRIPQ8NFW9 859 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 SMARCD1Q96GM5 515 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 THAP2Q9H0W7 228 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 CSNK1G1Q9HCP0 422 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 SALL4Q9UJQ4 1053 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 YIPF1Q9Y548 306 aa17.44■□□□□ 0.38
SHOX-201ENST00000334060 GOLGA6L6A8MZA4 724 aa17.43■□□□□ 0.38
SHOX-201ENST00000334060 FTLP02792 175 aaPredicted RBP17.43■□□□□ 0.38
SHOX-201ENST00000334060 CDH5P33151 784 aaPredicted RBP17.43■□□□□ 0.38
SHOX-201ENST00000334060 BCAT1P54687 386 aa17.43■□□□□ 0.38
SHOX-201ENST00000334060 CENPCQ03188 943 aa17.43■□□□□ 0.38
SHOX-201ENST00000334060 BMS1Q14692 1282 aaKnown RBP17.43■□□□□ 0.38
SHOX-201ENST00000334060 MON1BQ7L1V2 547 aa17.43■□□□□ 0.38
SHOX-201ENST00000334060 CPNE8Q86YQ8 564 aa17.43■□□□□ 0.38
SHOX-201ENST00000334060 TMTC1Q8IUR5 882 aa17.43■□□□□ 0.38
SHOX-201ENST00000334060 MICALL1Q8N3F8 863 aa17.43■□□□□ 0.38
SHOX-201ENST00000334060 FAM124BQ9H5Z6 455 aaPredicted RBP17.43■□□□□ 0.38
SHOX-201ENST00000334060 NGRNQ9NPE2 291 aaKnown RBP17.43■□□□□ 0.38
SHOX-201ENST00000334060 HCFC1R1Q9NWW0 138 aa17.43■□□□□ 0.38
SHOX-201ENST00000334060 HESX1Q9UBX0 185 aa17.43■□□□□ 0.38
SHOX-201ENST00000334060 AFF4Q9UHB7 1163 aaKnown RBP17.43■□□□□ 0.38
SHOX-201ENST00000334060 FBXW11Q9UKB1 542 aa17.43■□□□□ 0.38
SHOX-201ENST00000334060 TNFRSF10BO14763 440 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 PAPSS1O43252 624 aaPredicted RBP17.42■□□□□ 0.38
SHOX-201ENST00000334060 GRAP2O75791 330 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 RRM1P23921 792 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 SLC5A3P53794 718 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 DLX2Q07687 328 aaPredicted RBP17.42■□□□□ 0.38
SHOX-201ENST00000334060 ADIGQ0VDE8 80 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 TWF1Q12792 350 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 HYAL1Q12794 435 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 BHLHA9Q7RTU4 235 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 KREMEN2Q8NCW0 462 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 MRPL38Q96DV4 380 aaKnown RBP17.42■□□□□ 0.38
SHOX-201ENST00000334060 MAN1C1Q9NR34 630 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 KIAA1257Q9ULG3 409 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 PATJQ8NI35 1801 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 MED7O43513 233 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 IGFBP4P22692 258 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 GALCP54803 685 aa17.42■□□□□ 0.38
SHOX-201ENST00000334060 RAB6CQ53S08 254 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms