RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 SIAH1Q8IUQ4 282 aa11.61□□□□□ -0.55
CCDC87-201ENST00000333861 TTLL6Q8N841 843 aa11.61□□□□□ -0.55
CCDC87-201ENST00000333861 HSD17B14Q9BPX1 270 aa11.61□□□□□ -0.55
CCDC87-201ENST00000333861 ZNF577Q9BSK1 485 aa11.61□□□□□ -0.55
CCDC87-201ENST00000333861 MAF1Q9H063 256 aa11.61□□□□□ -0.55
CCDC87-201ENST00000333861 RAB6CQ9H0N0 254 aa11.61□□□□□ -0.55
CCDC87-201ENST00000333861 PCSK1NQ9UHG2 260 aa11.61□□□□□ -0.55
CCDC87-201ENST00000333861 TRIM43BA6NCK2 446 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 GRIN3BO60391 1043 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 LPXNO60711 386 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 TCEA3O75764 348 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 TFAP2AP05549 437 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 C6orf222P0C671 652 aaPredicted RBP11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ADSSP30520 456 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 GTF2H1P32780 548 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 PGGT1BP53609 377 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ACTR3P61158 418 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ZNF200P98182 395 aaPredicted RBP11.6□□□□□ -0.55
CCDC87-201ENST00000333861 RABGAP1LQ5R372 815 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ACAD11Q709F0 780 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ANKRD23Q86SG2 305 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 CPNE9Q8IYJ1 553 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 RNF168Q8IYW5 571 aaPredicted RBP11.6□□□□□ -0.55
CCDC87-201ENST00000333861 STKLD1Q8NE28 680 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 NT5C1BQ96P26 610 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 CSRNP1Q96S65 589 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 PRPF18Q99633 342 aaKnown RBP11.6□□□□□ -0.55
CCDC87-201ENST00000333861 FAM213AQ9BRX8 229 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 APOL6Q9BWW8 343 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 WDR11Q9BZH6 1224 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 XPNPEP1Q9NQW7 623 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 UBAP1Q9NZ09 502 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 MAGED2Q9UNF1 606 aaPredicted RBP11.6□□□□□ -0.55
CCDC87-201ENST00000333861 SMG5Q9UPR3 1016 aaKnown RBP11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ZNF536O15090 1300 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 PIK3CDO00329 1044 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 TLR3O15455 904 aaKnown RBP11.6□□□□□ -0.55
CCDC87-201ENST00000333861 SNHG28P0DPA3 235 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 RPL10P27635 214 aaKnown RBP11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ACOT2P49753 483 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 FOLH1Q04609 750 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 PDK1Q15118 436 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 UGCGQ16739 394 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ANKDD1AQ495B1 522 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 C6orf163Q5TEZ5 329 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ACAD10Q6JQN1 1059 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 C1orf228Q6PIY5 440 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 NPNTQ6UXI9 565 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 TSHZ1Q6ZSZ6 1077 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 FAM71AQ8IYT1 594 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 C12orf50Q8NA57 414 aaPredicted RBP11.6□□□□□ -0.55
CCDC87-201ENST00000333861 IL31RAQ8NI17 732 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 PYROXD1Q8WU10 500 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 GAB3Q8WWW8 586 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 MIS12Q9H081 205 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 TMOD2Q9NZR1 351 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 LZTS1Q9Y250 596 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ACTL7BQ9Y614 415 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 SLX4Q8IY92 1834 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 ROBO3Q96MS0 1386 aa11.6□□□□□ -0.55
CCDC87-201ENST00000333861 COL11A2P13942 1736 aaPredicted RBP11.6□□□□□ -0.55
CCDC87-201ENST00000333861 NDUFB10O96000 172 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 CLPTM1O96005 669 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 CYP1A2P05177 515 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 SMIM18P0DKX4 95 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 UQCRBP14927 111 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 ANXA13P27216 316 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 PMLP29590 882 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 EMP3P54852 163 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 YWHAGP61981 247 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC87-201ENST00000333861 TLR1Q15399 786 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 SLC44A4Q53GD3 710 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 CDC42EP5Q6NZY7 148 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 TMEM270Q6UE05 265 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 PTAR1Q7Z6K3 402 aaPredicted RBP11.59□□□□□ -0.55
CCDC87-201ENST00000333861 ZNF554Q86TJ5 538 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 ACER1Q8TDN7 264 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 DGCR14Q96DF8 476 aaKnown RBP11.59□□□□□ -0.55
CCDC87-201ENST00000333861 DMAC2Q9NW81 257 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 HEY1Q9Y5J3 304 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 ITGBL1O95965 494 aaPredicted RBP11.59□□□□□ -0.55
CCDC87-201ENST00000333861 KLRC2P26717 231 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 AQP5P55064 265 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 SNRNP35Q16560 246 aaKnown RBP11.59□□□□□ -0.55
CCDC87-201ENST00000333861 Q3C1V9 767 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 B3GNT6Q6ZMB0 384 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 HAUS6Q7Z4H7 955 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 DHDDSQ86SQ9 333 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 PALM2Q8IXS6 379 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 UNC5BQ8IZJ1 945 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 MCOLN2Q8IZK6 566 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 CPXCR1Q8N123 301 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 CCDC89Q8N998 374 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 ZBTB8BQ8NAP8 495 aaPredicted RBP11.59□□□□□ -0.55
CCDC87-201ENST00000333861 HELQQ8TDG4 1101 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 DDX1Q92499 740 aaKnown RBP11.59□□□□□ -0.55
CCDC87-201ENST00000333861 ARMC7Q9H6L4 198 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 BTBD7Q9P203 1132 aa11.59□□□□□ -0.55
CCDC87-201ENST00000333861 RPL26L1Q9UNX3 145 aaKnown RBP11.59□□□□□ -0.55
CCDC87-201ENST00000333861 DENND3A2RUS2 1198 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms