RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SH3D19Q5HYK7 790 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 TREML2Q5T2D2 321 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 CLNKQ7Z7G1 428 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 RFX6Q8HWS3 928 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 TMEM192Q8IY95 271 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 ATP11CQ8NB49 1132 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 MICAL1Q8TDZ2 1067 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 SERAC1Q96JX3 654 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 ARL8BQ9NVJ2 186 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 SENP1Q9P0U3 644 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 MSCO60682 206 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 TPBGLP0DKB5 382 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 ELK3P41970 407 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 ASPAP45381 313 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 SLC8A3P57103 927 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 SESN3P58005 492 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 TRPC3Q13507 836 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 ZNF699Q32M78 642 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 ADGRD1Q6QNK2 874 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 CEP128Q6ZU80 1094 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 TTC7BQ86TV6 843 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 AGGF1Q8N302 714 aaeCLIP12.9□□□□□ -0.34
VPS33B-201ENST00000333371 TTC17Q96AE7 1141 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 FAM111AQ96PZ2 611 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 TWNKQ96RR1 684 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 ACSS3Q9H6R3 686 aa12.9□□□□□ -0.34
VPS33B-201ENST00000333371 ADM5C9JUS6 153 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 B4GALT5O43286 388 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 CALB2P22676 271 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 ERFP50548 548 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 FAXCQ5TGI0 409 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 DSTYKQ6XUX3 929 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 BANPQ8N9N5 519 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 ASCC2Q9H1I8 757 aaPredicted RBP12.89□□□□□ -0.35
VPS33B-201ENST00000333371 ADARB2Q9NS39 739 aaKnown RBP12.89□□□□□ -0.35
VPS33B-201ENST00000333371 DDX56Q9NY93 547 aaKnown RBP12.89□□□□□ -0.35
VPS33B-201ENST00000333371 HEY2Q9UBP5 337 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 SBF1O95248 1867 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 PTPRFP10586 1907 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 C2CD2LO14523 706 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 CSDE1O75534 798 aaKnown RBP12.89□□□□□ -0.35
VPS33B-201ENST00000333371 ZWINTO95229 277 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 ATG7O95352 703 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 LSM8O95777 96 aaKnown RBP12.89□□□□□ -0.35
VPS33B-201ENST00000333371 ERBB2P04626 1255 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 BGNP21810 368 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 UBA1P22314 1058 aaKnown RBP12.89□□□□□ -0.35
VPS33B-201ENST00000333371 SERPINB3P29508 390 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 SLC18A1P54219 525 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 EIF3EP60228 445 aaKnown RBP12.89□□□□□ -0.35
VPS33B-201ENST00000333371 FAAP100Q0VG06 881 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 KBTBD12Q3ZCT8 623 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 EP400NLQ6ZTU2 488 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 PRPF39Q86UA1 669 aaKnown RBP12.89□□□□□ -0.35
VPS33B-201ENST00000333371 NCAPG2Q86XI2 1143 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 WDR49Q8IV35 697 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 KCTD6Q8NC69 237 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 DNERQ8NFT8 737 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 STK32AQ8WU08 396 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 TRAPPC12Q8WVT3 735 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 SPDL1Q96EA4 605 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 TRIM56Q9BRZ2 755 aaKnown RBP12.89□□□□□ -0.35
VPS33B-201ENST00000333371 XYLT2Q9H1B5 865 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 R3HDMLQ9H3Y0 253 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 MANSC1Q9H8J5 431 aa12.89□□□□□ -0.35
VPS33B-201ENST00000333371 KBTBD13C9JR72 458 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 E5RJQ4 531 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 RBP3P10745 1247 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 MIPP30301 263 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 FYB2Q5VWT5 728 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 RNF149Q8NC42 400 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 INPP5DQ92835 1189 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 NAF1Q96HR8 494 aaKnown RBP12.88□□□□□ -0.35
VPS33B-201ENST00000333371 PEBP4Q96S96 227 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 CADM1Q9BY67 442 aaKnown RBP12.88□□□□□ -0.35
VPS33B-201ENST00000333371 MAF1Q9H063 256 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 SDCBP2Q9H190 292 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 LPXNO60711 386 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 GRAP2O75791 330 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 ATP5HO75947 161 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 PDHA1P08559 390 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 HOXC6P09630 235 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 PYGBP11216 843 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 EIF4BP23588 611 aaKnown RBP12.88□□□□□ -0.35
VPS33B-201ENST00000333371 PHBP35232 272 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 PTPN7P35236 360 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 IREB2P48200 963 aaKnown RBP12.88□□□□□ -0.35
VPS33B-201ENST00000333371 PTK7Q13308 1070 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 DUOXA2Q1HG44 320 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 KHDC1Q4VXA5 237 aaKnown RBP12.88□□□□□ -0.35
VPS33B-201ENST00000333371 SLC45A4Q5BKX6 768 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 CDHR3Q6ZTQ4 885 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 RFX8Q6ZV50 586 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 BBS12Q6ZW61 710 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 NIPA2Q8N8Q9 360 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 SPATA18Q8TC71 538 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms