RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 P3H4Q92791 437 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 CFAP36Q96G28 342 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 DCLK3Q9C098 648 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 CDC42EP4Q9H3Q1 356 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 ASB7Q9H672 318 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 RNF186Q9NXI6 227 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 DDX43Q9NXZ2 648 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 MORF4L1Q9UBU8 362 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 MYO18AQ92614 2054 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 PODXLO00592 558 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 KCNN4O15554 427 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 AVILO75366 819 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 APRTP07741 180 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 OR1G1P47890 313 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 TAF6P49848 677 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 PITX1P78337 314 aaPredicted RBP9.46□□□□□ -0.89
COPB2-201ENST00000333188 SOWAHAQ2M3V2 549 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 ALS2CLQ60I27 953 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 RWDD4Q6NW29 188 aaKnown RBP9.46□□□□□ -0.89
COPB2-201ENST00000333188 TTC30AQ86WT1 665 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 SH3TC2Q8TF17 1288 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 APBA2Q99767 749 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 STRIP2Q9ULQ0 834 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 CDH23Q9H251 3354 aa9.46□□□□□ -0.89
COPB2-201ENST00000333188 GOLGA8KD6RF30 607 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 MCF2LO15068 1137 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 HMBSP08397 361 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 F7P08709 466 aaPredicted RBP9.46□□□□□ -0.9
COPB2-201ENST00000333188 FGFR1P11362 822 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 SLC1A1P43005 524 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 GDF10P55107 478 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 ZNF252P-AS1Q0IIN9 211 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 C9orf57Q5W0N0 161 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 DEFB128Q7Z7B8 93 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 PALM2Q8IXS6 379 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 C4orf33Q8N1A6 199 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 RASGEF1CQ8N431 466 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 SLC7A14Q8TBB6 771 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 DEPDC1BQ8WUY9 529 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 ATP6V1G3Q96LB4 118 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 PPP1R12CQ9BZL4 782 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 UBQLN1Q9UMX0 589 aaKnown RBP9.46□□□□□ -0.9
COPB2-201ENST00000333188 DOCK1Q14185 1865 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 F2P00734 622 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 USP17L7P0C7H9 530 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 VDRP11473 427 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 PECAM1P16284 738 aaPredicted RBP9.46□□□□□ -0.9
COPB2-201ENST00000333188 CYP3A5P20815 502 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 GPD1P21695 349 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 DHX34Q14147 1143 aaKnown RBP9.46□□□□□ -0.9
COPB2-201ENST00000333188 CA9Q16790 459 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 PLEKHA7Q6IQ23 1121 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 FAM228AQ86W67 206 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 XYLT1Q86Y38 959 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 TRPV1Q8NER1 839 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 CCDC110Q8TBZ0 833 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 EXOC4Q96A65 974 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 RBM41Q96IZ5 413 aaKnown RBP9.46□□□□□ -0.9
COPB2-201ENST00000333188 RAB6BQ9NRW1 208 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 KRT82Q9NSB4 513 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 ASNSD1Q9NWL6 643 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 GJD2Q9UKL4 321 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 CHMP2BQ9UQN3 213 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 NEU2Q9Y3R4 380 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 SNX10Q9Y5X0 201 aa9.46□□□□□ -0.9
COPB2-201ENST00000333188 PQBP1O60828 265 aaKnown RBP9.45□□□□□ -0.9
COPB2-201ENST00000333188 NEBLO76041 1014 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 BEST1O76090 585 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 HMGCRP04035 888 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 THP07101 528 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 NCAM1P13591 858 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 SAT1P21673 171 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 BDNFP23560 247 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 IRAK1P51617 712 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 PURAQ00577 322 aaKnown RBP9.45□□□□□ -0.9
COPB2-201ENST00000333188 PIGHQ14442 188 aaPredicted RBP9.45□□□□□ -0.9
COPB2-201ENST00000333188 TFDP3Q5H9I0 405 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 SPOUT1Q5T280 376 aaKnown RBP9.45□□□□□ -0.9
COPB2-201ENST00000333188 DUPD1Q68J44 220 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 FAM47EQ6ZV65 393 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 PIGZQ86VD9 579 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 PHF13Q86YI8 300 aaPredicted RBP9.45□□□□□ -0.9
COPB2-201ENST00000333188 PAF1Q8N7H5 531 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 C3orf20Q8ND61 904 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 USP33Q8TEY7 942 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 ATXN7L3BQ96GX2 97 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 SNF8Q96H20 258 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 SLITRK1Q96PX8 696 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 TRIM56Q9BRZ2 755 aaKnown RBP9.45□□□□□ -0.9
COPB2-201ENST00000333188 KATNBL1Q9H079 304 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 TSPYL2Q9H2G4 693 aaPredicted RBP9.45□□□□□ -0.9
COPB2-201ENST00000333188 ABI2Q9NYB9 513 aaPredicted RBP9.45□□□□□ -0.9
COPB2-201ENST00000333188 TMEM59LQ9UK28 342 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 PADI3Q9ULW8 664 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 NENFQ9UMX5 172 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.45□□□□□ -0.9
COPB2-201ENST00000333188 EXOC1LA0A1B0GW35 172 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 MYBPHLA2RUH7 354 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 M0QYT0 321 aa9.45□□□□□ -0.9
COPB2-201ENST00000333188 GPR32O75388 356 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms