RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 CCDC78A2IDD5 438 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 EDF1O60869 148 aaKnown RBP12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 MYL2P10916 166 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 KDELR1P24390 212 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 HMGB2P26583 209 aaKnown RBP12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 BCAR1P56945 870 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 CRADDP78560 199 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 ZNF200P98182 395 aaPredicted RBP12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 FAM13CQ8NE31 585 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 FAM149B1Q96BN6 582 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 PRR11Q96HE9 360 aaPredicted RBP12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 SPATA33Q96N06 139 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 ACAP3Q96P50 834 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 DDX56Q9NY93 547 aaKnown RBP12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 USP18Q9UMW8 372 aa12.34□□□□□ -0.43
EFCAB13-201ENST00000331493 FAM237BA0A1B0GVD1 139 aa12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 NFICP08651 508 aa12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 YWHAEP62258 255 aaKnown RBP12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 PDK4Q16654 411 aa12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 WLSQ5T9L3 541 aa12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 RFWD3Q6PCD5 774 aa12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 SLC25A41Q8N5S1 370 aa12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 RDM1Q8NG50 284 aa12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 SEPT1Q8WYJ6 367 aa12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 SLCO2A1Q92959 643 aa12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 TTC1Q99614 292 aa12.33□□□□□ -0.43
EFCAB13-201ENST00000331493 IQANK1A0A1B0GTG1 560 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 H3BRJ5 948 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 FGFR1P11362 822 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 GLRA4Q5JXX5 417 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 EFCAB12Q6NXP0 572 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 BRSK2Q8IWQ3 736 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 FBXO16Q8IX29 292 aaPredicted RBP12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 PTPRN2Q92932 1015 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 ZC3H7BQ9UGR2 993 aaKnown RBP12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 MRPL42Q9Y6G3 142 aaKnown RBP12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 CYB561D2O14569 222 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 ALOX15BO15296 676 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 RCN1Q15293 331 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 KLHL38Q2WGJ6 581 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 ZC3H12AQ5D1E8 599 aaKnown RBP12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 CAPRIN2Q6IMN6 1127 aaKnown RBP12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 IGDCC3Q8IVU1 814 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 RXFP2Q8WXD0 754 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 VCPIP1Q96JH7 1222 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 PPP1R36Q96LQ0 422 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 ZNF570Q96NI8 536 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 TWNKQ96RR1 684 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 TMEM120AQ9BXJ8 343 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 DHX35Q9H5Z1 703 aaKnown RBP12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 ARHGEF3Q9NR81 526 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 KCNG1Q9UIX4 513 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 CLUHO75153 1309 aa12.33□□□□□ -0.44
EFCAB13-201ENST00000331493 SPATA31C2B4DYI2 1134 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 VTNP04004 478 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 F7P08709 466 aaPredicted RBP12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 PDGFRBP09619 1106 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 SESN2P58004 480 aaPredicted RBP12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 RNF43Q68DV7 783 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 C15orf39Q6ZRI6 1047 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 SCUBE3Q8IX30 993 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 KIAA0319LQ8IZA0 1049 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 WDTC1Q8N5D0 677 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 CCDC124Q96CT7 223 aaKnown RBP12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 TEPSINQ96N21 525 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 ARL8BQ9NVJ2 186 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 LGALS13Q9UHV8 139 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 STRIP2Q9ULQ0 834 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 SHOC2Q9UQ13 582 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 TTLL3Q9Y4R7 772 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 MED7O43513 233 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 TOP3BO95985 862 aaKnown RBP12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 ERBB2P04626 1255 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 GCAP28676 217 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 RXRBP28702 533 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 PHKA2P46019 1235 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 TCEAL1Q15170 157 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 TSNAXIP1Q2TAA8 658 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 BZW1Q7L1Q6 419 aaKnown RBP12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 LMNTD2Q8IXW0 634 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 CCNYQ8ND76 341 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 DHX33Q9H6R0 707 aaKnown RBP12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 RABGEF1Q9UJ41 708 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 CEP350Q5VT06 3117 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 B2RBV5 119 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 PMM2O15305 246 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 UGT1A9O60656 530 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 DPYSL3Q14195 570 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 RIBC1Q8N443 379 aaPredicted RBP12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 NLRP7Q8WX94 980 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 NAF1Q96HR8 494 aaKnown RBP12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 FAM49AQ9H0Q0 323 aaPredicted RBP12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 R3HDMLQ9H3Y0 253 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 DENND2DQ9H6A0 471 aaPredicted RBP12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 UGT1A7Q9HAW7 530 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 UGT1A10Q9HAW8 530 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 UGT1A8Q9HAW9 530 aa12.32□□□□□ -0.44
EFCAB13-201ENST00000331493 CYP4F11Q9HBI6 524 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms