RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 SDHAF4Q5VUM1 108 aa16.98■□□□□ 0.31
LRRC28-202ENST00000331450 E4F1Q66K89 784 aaPredicted RBP16.98■□□□□ 0.31
LRRC28-202ENST00000331450 NOP9Q86U38 636 aaKnown RBP16.98■□□□□ 0.31
LRRC28-202ENST00000331450 TMC8Q8IU68 726 aa16.98■□□□□ 0.31
LRRC28-202ENST00000331450 STKLD1Q8NE28 680 aa16.98■□□□□ 0.31
LRRC28-202ENST00000331450 GPR152Q8TDT2 470 aa16.98■□□□□ 0.31
LRRC28-202ENST00000331450 HCFC1R1Q9NWW0 138 aa16.98■□□□□ 0.31
LRRC28-202ENST00000331450 DNMT3BQ9UBC3 853 aaKnown RBP16.98■□□□□ 0.31
LRRC28-202ENST00000331450 HESX1Q9UBX0 185 aa16.98■□□□□ 0.31
LRRC28-202ENST00000331450 PCDHGC3Q9UN70 934 aa16.98■□□□□ 0.31
LRRC28-202ENST00000331450 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.98■□□□□ 0.31
LRRC28-202ENST00000331450 NUP210Q8TEM1 1887 aaPredicted RBP16.98■□□□□ 0.31
LRRC28-202ENST00000331450 HELZP42694 1942 aaKnown RBP16.98■□□□□ 0.31
LRRC28-202ENST00000331450 SLC38A8A6NNN8 435 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 MBTPS2O43462 519 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 SETSIPP0DME0 302 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 FERP16591 822 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 ANXA13P27216 316 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 PDE6CP51160 858 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 MAP3K7CLP57077 242 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 PDE4CQ08493 712 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 TBX2Q13207 712 aaPredicted RBP16.97■□□□□ 0.31
LRRC28-202ENST00000331450 MTMR3Q13615 1198 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 CES5AQ6NT32 575 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 ITIH5Q86UX2 942 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 FMNL3Q8IVF7 1028 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.97■□□□□ 0.31
LRRC28-202ENST00000331450 GIPC2Q8TF65 315 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 TRMT2BQ96GJ1 504 aaKnown RBP16.97■□□□□ 0.31
LRRC28-202ENST00000331450 MYRFLQ96LU7 910 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 TTLL2Q9BWV7 592 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 AVENQ9NQS1 362 aaPredicted RBP16.97■□□□□ 0.31
LRRC28-202ENST00000331450 AIPL1Q9NZN9 384 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 THEGQ9P2T0 379 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 USP15Q9Y4E8 981 aaPredicted RBP16.97■□□□□ 0.31
LRRC28-202ENST00000331450 DOCK8Q8NF50 2099 aa16.97■□□□□ 0.31
LRRC28-202ENST00000331450 M0QYV0 167 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 TULP2O00295 520 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 XPO1O14980 1071 aaKnown RBP16.96■□□□□ 0.31
LRRC28-202ENST00000331450 CSH1P0DML2 217 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 CSH2P0DML3 217 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 PTPN2P17706 415 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 CASP14P31944 242 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 SSTR3P32745 418 aaPredicted RBP16.96■□□□□ 0.31
LRRC28-202ENST00000331450 MTHFRP42898 656 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 PLA2G4AP47712 749 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 ZBED6P86452 979 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 TFF2Q03403 129 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 ARID5BQ14865 1188 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 DENND1BQ6P3S1 775 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 DENND5BQ6ZUT9 1274 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 GPRIN1Q7Z2K8 1008 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 IRF2BP2Q7Z5L9 587 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 GRASPQ7Z6J2 395 aaPredicted RBP16.96■□□□□ 0.31
LRRC28-202ENST00000331450 DNAJB7Q7Z6W7 309 aaPredicted RBP16.96■□□□□ 0.31
LRRC28-202ENST00000331450 GPIHBP1Q8IV16 184 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 ELMOD1Q8N336 334 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 OLIG1Q8TAK6 271 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 UBA3Q8TBC4 463 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 SLC35F5Q8WV83 523 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 ZNF512Q96ME7 567 aaPredicted RBP16.96■□□□□ 0.31
LRRC28-202ENST00000331450 SYT11Q9BT88 431 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 UBXN6Q9BZV1 441 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 IL21Q9HBE4 155 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 ZNF334Q9HCZ1 680 aaPredicted RBP16.96■□□□□ 0.31
LRRC28-202ENST00000331450 IL37Q9NZH6 218 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 PRUNE2Q8WUY3 3088 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 COL6A3P12111 3177 aa16.96■□□□□ 0.31
LRRC28-202ENST00000331450 CLUHO75153 1309 aa16.96■□□□□ 0.3
LRRC28-202ENST00000331450 FAM92AA1XBS5 289 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 RHOP08100 348 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 CDH5P33151 784 aaPredicted RBP16.95■□□□□ 0.3
LRRC28-202ENST00000331450 PRKCIP41743 596 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 GPD2P43304 727 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 SLC5A3P53794 718 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 USP46P62068 366 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 NTHL1P78549 312 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 CBX2Q14781 532 aaPredicted RBP16.95■□□□□ 0.3
LRRC28-202ENST00000331450 RAB41Q5JT25 222 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 PRSS36Q5K4E3 855 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 SFMBT2Q5VUG0 894 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 TMC6Q7Z403 805 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 PIGZQ86VD9 579 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 ZNF677Q86XU0 584 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 HS6ST3Q8IZP7 471 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 NUP93Q8N1F7 819 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 LEMD2Q8NC56 503 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 SLC20A1Q8WUM9 679 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 SYN2Q92777 582 aaPredicted RBP16.95■□□□□ 0.3
LRRC28-202ENST00000331450 SECISBP2LQ93073 1101 aaKnown RBP16.95■□□□□ 0.3
LRRC28-202ENST00000331450 RIPOR3Q96MK2 946 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 CORO1BQ9BR76 489 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 NUCKS1Q9H1E3 243 aaKnown RBP16.95■□□□□ 0.3
LRRC28-202ENST00000331450 LHX5Q9H2C1 402 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 POMKQ9H5K3 350 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 PIDD1Q9HB75 910 aa16.95■□□□□ 0.3
LRRC28-202ENST00000331450 WDR6Q9NNW5 1121 aaKnown RBP16.95■□□□□ 0.3
LRRC28-202ENST00000331450 LUC7L2Q9Y383 392 aaKnown RBP16.95■□□□□ 0.3
LRRC28-202ENST00000331450 NRG2O14511 850 aaPredicted RBP16.94■□□□□ 0.3
LRRC28-202ENST00000331450 TADA3O75528 432 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms