RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 ZNF143P52747 638 aaPredicted RBP15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 PDIA2Q13087 525 aaKnown RBP15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 SMYD5Q6GMV2 418 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 LCLAT1Q6UWP7 414 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 ZNF467Q7Z7K2 595 aaPredicted RBP15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 CCDC13Q8IYE1 715 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 CCDC197Q8NCU1 140 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 CMASQ8NFW8 434 aaPredicted RBP15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 RXFP2Q8WXD0 754 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 MRPL45Q9BRJ2 306 aaKnown RBP15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 EIF2AQ9BY44 585 aaKnown RBP15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 VPS37BQ9H9H4 285 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 CDHR5Q9HBB8 845 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 SHOC2Q9UQ13 582 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 SNX9Q9Y5X1 595 aa15.58■□□□□ 0.09
CLCNKA-201ENST00000331433 DNAH12Q6ZR08 3092 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 GLTPD2A6NH11 291 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 POC1B-GALNT4F8VUJ3 575 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 ATP2C2O75185 946 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 PDGFRAP16234 1089 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 GPD1P21695 349 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 HOXA11P31270 313 aaPredicted RBP15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 ACVR2BQ13705 512 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 DGKDQ16760 1214 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 GOLGA7BQ2TAP0 167 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 GLRA4Q5JXX5 417 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 PPP1R26Q5T8A7 1209 aaPredicted RBP15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 CEP128Q6ZU80 1094 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 PIGWQ7Z7B1 504 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 ACOT1Q86TX2 421 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 ANKMY2Q8IV38 441 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 UNC45BQ8IWX7 931 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 RSAD2Q8WXG1 361 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 MRRFQ96E11 262 aaKnown RBP15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 TINF2Q9BSI4 451 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 FAM49BQ9NUQ9 324 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 ASNSD1Q9NWL6 643 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 MORF4L1Q9UBU8 362 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 TUBGCP4Q9UGJ1 667 aa15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 FARP1Q9Y4F1 1045 aaPredicted RBP15.58■□□□□ 0.08
CLCNKA-201ENST00000331433 C2CD4BA6NLJ0 364 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 TCP11X1B4DZS4 312 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 RASA4BC9J798 803 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 RASA4O43374 803 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 GTF2A2P52657 109 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 GRB14Q14449 540 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 NPNTQ6UXI9 565 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 CYP4V2Q6ZWL3 525 aaPredicted RBP15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 FAM71DQ8N9W8 422 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 TTC13Q8NBP0 860 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 CPT1BQ92523 772 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 C18orf25Q96B23 403 aaPredicted RBP15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 SAMD15Q9P1V8 674 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 NME7Q9Y5B8 376 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 H0YHG0 523 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 DNM1LO00429 736 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 RPL22P35268 128 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 GCLCP48506 637 aaPredicted RBP15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 CDH6P55285 790 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 EIF3EP60228 445 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 ATP11AP98196 1134 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 ACTN3Q08043 901 aaPredicted RBP15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 CCDC142Q17RM4 750 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 PMF1Q6P1K2 205 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 CENPUQ71F23 418 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 CATSPER4Q7RTX7 472 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 ZNF410Q86VK4 478 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 NPLOC4Q8TAT6 608 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 MAML1Q92585 1016 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 TTC25Q96NG3 672 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 OSMRQ99650 979 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 CNPY3Q9BT09 278 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 ADAM33Q9BZ11 813 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 ADAMTS10Q9H324 1103 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 FGFR1OP2Q9NVK5 253 aa15.57■□□□□ 0.08
CLCNKA-201ENST00000331433 TCRBV7S3A2A0A539 114 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 APOC4-APOC2K7ER74 178 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 ALOX15BO15296 676 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 STAU1O95793 577 aaKnown RBP15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 APOC2P02655 101 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 HOXD8P13378 290 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 PCK1P35558 622 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 HIF1AQ16665 826 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 MSS51Q4VC12 460 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 ANKRD20A8PQ5CZ79 823 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 PRAMEF19Q5SWL8 479 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 TTC30AQ86WT1 665 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 SPATA18Q8TC71 538 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 LPIN3Q9BQK8 851 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 ABHD16BQ9H3Z7 469 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 SLC45A1Q9Y2W3 748 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 HCRTO43612 131 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 RBP3P10745 1247 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 ACAP1Q15027 740 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 DCAF4L1Q3SXM0 396 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 FNBP1LQ5T0N5 605 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 ZC3H18Q86VM9 953 aaKnown RBP15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 NT5DC4Q86YG4 428 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 PPIL6Q8IXY8 311 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms