RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 TLR1Q15399 786 aa25.39■■□□□ 1.65
SOX1-201ENST00000330949 MYLK3Q32MK0 819 aa25.39■■□□□ 1.65
SOX1-201ENST00000330949 C1orf220Q5T0J3 134 aa25.39■■□□□ 1.65
SOX1-201ENST00000330949 LRRC8BQ6P9F7 803 aa25.39■■□□□ 1.65
SOX1-201ENST00000330949 CROCCP3Q8IVE0 287 aa25.39■■□□□ 1.65
SOX1-201ENST00000330949 IKBKGQ9Y6K9 419 aa25.39■■□□□ 1.65
SOX1-201ENST00000330949 EEF2P13639 858 aaKnown RBP25.38■■□□□ 1.65
SOX1-201ENST00000330949 AOC1P19801 751 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 VARSP26640 1264 aaKnown RBP25.38■■□□□ 1.65
SOX1-201ENST00000330949 PMLP29590 882 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 HOXA13P31271 388 aaPredicted RBP25.38■■□□□ 1.65
SOX1-201ENST00000330949 NFX1Q12986 1120 aaKnown RBP25.38■■□□□ 1.65
SOX1-201ENST00000330949 SNAPC2Q13487 334 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 KRT81Q14533 505 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 CRY2Q49AN0 593 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 TSHZ1Q6ZSZ6 1077 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 TPH2Q8IWU9 490 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 GCNAQ96QF7 691 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 P2RX7Q99572 595 aaKnown RBP25.38■■□□□ 1.65
SOX1-201ENST00000330949 HSD17B14Q9BPX1 270 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 SENP6Q9GZR1 1112 aaPredicted RBP25.38■■□□□ 1.65
SOX1-201ENST00000330949 SMYD3Q9H7B4 428 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 PCDH9Q9HC56 1237 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 DTNAQ9Y4J8 743 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 GOLGA8SH3BPF8 625 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 GOLGA8MH3BSY2 632 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 MEIS2O14770 477 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 PIAS1O75925 651 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 TAS2R40P59535 323 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 CYP2W1Q8TAV3 490 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 PRPF31Q8WWY3 499 aaKnown RBP25.38■■□□□ 1.65
SOX1-201ENST00000330949 RILPQ96NA2 401 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 KCND2Q9NZV8 630 aa25.38■■□□□ 1.65
SOX1-201ENST00000330949 TTLL13PA6NNM8 815 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 GJC1P36383 396 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 PALM2Q8IXS6 379 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 AHI1Q8N157 1196 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 TEKT1Q969V4 418 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 ACAP3Q96P50 834 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 ZC3H12CQ9C0D7 883 aaKnown RBP25.37■■□□□ 1.65
SOX1-201ENST00000330949 GDF11O95390 407 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 UNGP13051 313 aaPredicted RBP25.37■■□□□ 1.65
SOX1-201ENST00000330949 RAG1P15918 1043 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 AQP5P55064 265 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 LPIN1Q14693 890 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 CDC42EP5Q6NZY7 148 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 STRA6Q9BX79 667 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 RMI1Q9H9A7 625 aa25.37■■□□□ 1.65
SOX1-201ENST00000330949 IGKV6D-41A0A0C4DH26 115 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 MEI4A8MW99 385 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 E9PBE3 544 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 PDE5AO76074 875 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 PCSK6P29122 969 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 TMPRSS15P98073 1019 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 PLCB3Q01970 1234 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 PTK7Q13308 1070 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 C15orf52Q6ZUT6 534 aaKnown RBP25.36■■□□□ 1.65
SOX1-201ENST00000330949 BBS5Q8N3I7 341 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 SERAC1Q96JX3 654 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 ZNF696Q9H7X3 374 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 DBNDD1Q9H9R9 158 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 SLC5A2P31639 672 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 SLC25A3Q00325 362 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 OGFRL1Q5TC84 451 aaPredicted RBP25.36■■□□□ 1.65
SOX1-201ENST00000330949 KAZNQ674X7 775 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 MRPL1Q9BYD6 325 aaKnown RBP25.36■■□□□ 1.65
SOX1-201ENST00000330949 TMEM206Q9H813 350 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 ZNF711Q9Y462 761 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 ZNF536O15090 1300 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 SPDYE16A6NNV3 312 aaPredicted RBP25.36■■□□□ 1.65
SOX1-201ENST00000330949 E2F6O75461 281 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 ATP6V1B1P15313 513 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 PORP16435 677 aaPredicted RBP25.36■■□□□ 1.65
SOX1-201ENST00000330949 BST1Q10588 318 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 RABGAP1LQ5R372 815 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 RHPN2Q8IUC4 686 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 XXYLT1Q8NBI6 393 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 TMEM174Q8WUU8 243 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 HSPBAP1Q96EW2 488 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 AK5Q9Y6K8 562 aa25.36■■□□□ 1.65
SOX1-201ENST00000330949 CRLF3Q8IUI8 442 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 FBXO36Q8NEA4 188 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 INPP5FQ9Y2H2 1132 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 FARP1Q9Y4F1 1045 aaPredicted RBP25.35■■□□□ 1.65
SOX1-201ENST00000330949 CAPN8A6NHC0 703 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 CHMP2AO43633 222 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 TSHRP16473 764 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 SREBF1P36956 1147 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 EPHB1P54762 984 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 VCPP55072 806 aaKnown RBP25.35■■□□□ 1.65
SOX1-201ENST00000330949 RCOR2Q8IZ40 523 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 HELQQ8TDG4 1101 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 E2F7Q96AV8 911 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 ITGB1BP2Q9UKP3 347 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 RAB26Q9ULW5 256 aa25.35■■□□□ 1.65
SOX1-201ENST00000330949 FAF1Q9UNN5 650 aaPredicted RBP25.35■■□□□ 1.65
SOX1-201ENST00000330949 COPEO14579 308 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 IFNB1P01574 187 aa25.34■■□□□ 1.65
SOX1-201ENST00000330949 C6orf222P0C671 652 aaPredicted RBP25.34■■□□□ 1.65
SOX1-201ENST00000330949 MLH1P40692 756 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms